RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 HSD3B7Q9H2F3 369 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 GAL3ST2Q9H3Q3 398 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 ABHD16BQ9H3Z7 469 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 OPA3Q9H6K4 179 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 FOLH1BQ9HBA9 442 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 LRRC4Q9HBW1 653 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 TMEM8AQ9HCN3 771 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 MID1IP1Q9NPA3 183 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 XPNPEP1Q9NQW7 623 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 CTPS2Q9NRF8 586 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 ABCC13Q9NSE7 274 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 SDHAF2Q9NX18 166 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 NKIRAS1Q9NYS0 192 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 TREM2Q9NZC2 230 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 NDRG3Q9UGV2 375 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 TUBD1Q9UJT1 453 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 ZNF229Q9UJW7 825 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 ANAPC2Q9UJX6 822 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 ERVW-1Q9UQF0 538 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 LIPT1Q9Y234 373 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 TP53TG5Q9Y2B4 290 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 SLC9A8Q9Y2E8 581 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.2□□□□□ -1.74
ATXN3-227ENST00000554491 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-227ENST00000554491 MRPS2Q9Y399 296 aaKnown RBP4.2□□□□□ -1.74
ATXN3-227ENST00000554491 PSAT1Q9Y617 370 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 PATJQ8NI35 1801 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 IGF2RP11717 2491 aa4.2□□□□□ -1.74
ATXN3-227ENST00000554491 ASPMQ8IZT6 3477 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 GREB1LQ9C091 1923 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 CEP295Q9C0D2 2601 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 A0A0X1KG70 313 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 A0A1B0GVM2 712 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 A0A1W2PPH5 198 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 A0A1W2PPQ1 181 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 FAM149AA5PLN7 773 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 HACD1B0YJ81 288 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 KLRF2D3W0D1 207 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 E9PLN8 166 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 H7C1Q1 480 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 CCDC188H7C350 402 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 MEIS2O14770 477 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 PSMA7O14818 248 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 PHYHO14832 338 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 SLC16A6O15403 523 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 CD3EAPO15446 510 aaKnown RBP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 LINC01565O15544 149 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 HSPA12AO43301 675 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 HTRA2O43464 458 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 CALUO43852 315 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 GMFGO60234 142 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 TBC1D4O60343 1298 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 SPAG7O75391 227 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 MED6O75586 246 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 SLC22A5O76082 557 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 PRAMEF12O95522 483 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 LGI1O95970 557 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 AGTP01019 485 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 IL1AP01583 271 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 CYC1P08574 325 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 HCKP08631 526 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 NR2F6P10588 404 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 RNH1P13489 461 aaKnown RBP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 CD1EP15812 388 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 SPI1P17947 270 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 XRCC1P18887 633 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 OGNP20774 298 aaKnown RBP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 NT5EP21589 574 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 YWHAQP27348 245 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 ERP29P30040 261 aaKnown RBP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 RYKP34925 604 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 RORAP35398 523 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 GJC1P36383 396 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 CDKN2CP42773 168 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 GABRB2P47870 512 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 PITPNBP48739 271 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 SLC11A1P49279 550 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 GPR143P51810 404 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 LUMP51884 338 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 ATXN3P54252 364 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 NXPH1P58417 271 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 SNAP25P60880 206 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 IFI35P80217 286 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 CDC42EP1Q00587 391 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 ZNF45Q02386 682 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 ACSM1Q08AH1 577 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 SLC10A2Q12908 348 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 TSPAN31Q12999 210 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 IL24Q13007 206 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 GAGE1Q13065 139 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 PRKAA1Q13131 559 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 ASAH1Q13510 395 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 BFSP2Q13515 415 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 GRB7Q14451 532 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 HNF4GQ14541 408 aa4.19□□□□□ -1.74
ATXN3-227ENST00000554491 ZNF267Q14586 743 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 HLXQ14774 488 aaPredicted RBP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 PCBP2Q15366 365 aaKnown RBP eCLIP4.19□□□□□ -1.74
ATXN3-227ENST00000554491 TAB1Q15750 504 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms