RNA–Protein interactions for RNA: ENST00000554315.5

NUMB-209, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best)

Gene NUMB, Length 1,740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-209ENST00000554315 RNF4P78317 190 aa12.82□□□□□ -0.36
NUMB-209ENST00000554315 ZNF763Q0D2J5 394 aa12.82□□□□□ -0.36
NUMB-209ENST00000554315 C2orf80Q0P641 193 aa12.82□□□□□ -0.36
NUMB-209ENST00000554315 STX3Q13277 289 aa12.82□□□□□ -0.36
NUMB-209ENST00000554315 ZNF267Q14586 743 aaPredicted RBP12.82□□□□□ -0.36
NUMB-209ENST00000554315 INAQ16352 499 aa12.82□□□□□ -0.36
NUMB-209ENST00000554315 UGT3A2Q3SY77 523 aa12.82□□□□□ -0.36
NUMB-209ENST00000554315 COLEC12Q5KU26 742 aa12.82□□□□□ -0.36
NUMB-209ENST00000554315 SLC29A4Q7RTT9 530 aa12.82□□□□□ -0.36
NUMB-209ENST00000554315 CNTRLQ7Z7A1 2325 aa12.82□□□□□ -0.36
NUMB-209ENST00000554315 TRIM42Q8IWZ5 723 aa12.82□□□□□ -0.36
NUMB-209ENST00000554315 GPALPP1Q8IXQ4 340 aa12.82□□□□□ -0.36
NUMB-209ENST00000554315 CISD2Q8N5K1 135 aaKnown RBP12.82□□□□□ -0.36
NUMB-209ENST00000554315 TNRC6AQ8NDV7 1962 aaKnown RBP12.82□□□□□ -0.36
NUMB-209ENST00000554315 ZNF721Q8TF20 911 aa12.82□□□□□ -0.36
NUMB-209ENST00000554315 THAP3Q8WTV1 239 aaPredicted RBP12.82□□□□□ -0.36
NUMB-209ENST00000554315 TWIST2Q8WVJ9 160 aa12.82□□□□□ -0.36
NUMB-209ENST00000554315 PPP3R2Q96LZ3 170 aa12.82□□□□□ -0.36
NUMB-209ENST00000554315 C5orf34Q96MH7 638 aa12.82□□□□□ -0.36
NUMB-209ENST00000554315 TRIM45Q9H8W5 580 aaPredicted RBP12.82□□□□□ -0.36
NUMB-209ENST00000554315 VIPAS39Q9H9C1 493 aa12.82□□□□□ -0.36
NUMB-209ENST00000554315 CXorf21Q9HAI6 301 aa12.82□□□□□ -0.36
NUMB-209ENST00000554315 LRFN1Q9P244 771 aa12.82□□□□□ -0.36
NUMB-209ENST00000554315 ZDHHC2Q9UIJ5 367 aa12.82□□□□□ -0.36
NUMB-209ENST00000554315 UTS2RQ9UKP6 389 aa12.82□□□□□ -0.36
NUMB-209ENST00000554315 VPS4AQ9UN37 437 aa12.82□□□□□ -0.36
NUMB-209ENST00000554315 CCL27Q9Y4X3 112 aa12.82□□□□□ -0.36
NUMB-209ENST00000554315 CFAP46Q8IYW2 2715 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 TMEM120BA0PK00 339 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 WISP1O95388 367 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 IL3P08700 152 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 NT5EP21589 574 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 SLC1A6P48664 564 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 SSR4P51571 173 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 FOXK1P85037 733 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 MPP2Q14168 576 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 NR6A1Q15406 480 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 OR1C1Q15619 314 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 ZNF766Q5HY98 468 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 RNF111Q6ZNA4 994 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 Q6ZSR9 355 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 IKBIPQ70UQ0 350 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 GALNT12Q8IXK2 581 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 AMER2Q8N7J2 671 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 ANKRD42Q8N9B4 389 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 TMEM178AQ8NBL3 297 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 OR7G1Q8NGA0 311 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 DNAJB8Q8NHS0 232 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 NUBPLQ8TB37 319 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 UCN3Q969E3 161 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 ZBTB9Q96C00 473 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 TLCD1Q96CP7 247 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 KLHL29Q96CT2 875 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 SNRNP40Q96DI7 357 aaKnown RBP12.81□□□□□ -0.36
NUMB-209ENST00000554315 NPAS2Q99743 824 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 CNPPD1Q9BV87 410 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 MIEF1Q9NQG6 463 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 LUZP4Q9P127 313 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 CFL2Q9Y281 166 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 RAP2CQ9Y3L5 183 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 CSAG2Q9Y5P2 127 aa12.81□□□□□ -0.36
NUMB-209ENST00000554315 ITGA10O75578 1167 aa12.8□□□□□ -0.36
NUMB-209ENST00000554315 BCAS2O75934 225 aaPredicted RBP12.8□□□□□ -0.36
NUMB-209ENST00000554315 RASAL1O95294 804 aa12.8□□□□□ -0.36
NUMB-209ENST00000554315 F10P00742 488 aa12.8□□□□□ -0.36
NUMB-209ENST00000554315 CRYABP02511 175 aaKnown RBP12.8□□□□□ -0.36
NUMB-209ENST00000554315 IGKV3-11P04433 115 aa12.8□□□□□ -0.36
NUMB-209ENST00000554315 ATP1B1P05026 303 aa12.8□□□□□ -0.36
NUMB-209ENST00000554315 DDCP20711 480 aa12.8□□□□□ -0.36
NUMB-209ENST00000554315 MAPK1P28482 360 aa12.8□□□□□ -0.36
NUMB-209ENST00000554315 FEN1P39748 380 aaKnown RBP12.8□□□□□ -0.36
NUMB-209ENST00000554315 KCNC4Q03721 635 aa12.8□□□□□ -0.36
NUMB-209ENST00000554315 MAP4K2Q12851 820 aa12.8□□□□□ -0.36
NUMB-209ENST00000554315 KIAA0040Q15053 153 aa12.8□□□□□ -0.36
NUMB-209ENST00000554315 MPEG1Q2M385 716 aa12.8□□□□□ -0.36
NUMB-209ENST00000554315 ATG16L1Q676U5 607 aa12.8□□□□□ -0.36
NUMB-209ENST00000554315 SLC25A25Q6KCM7 469 aa12.8□□□□□ -0.36
NUMB-209ENST00000554315 FAM180AQ6UWF9 173 aa12.8□□□□□ -0.36
NUMB-209ENST00000554315 SLC15A4Q8N697 577 aa12.8□□□□□ -0.36
NUMB-209ENST00000554315 FAM98AQ8NCA5 519 aaKnown RBP12.8□□□□□ -0.36
NUMB-209ENST00000554315 GALNT11Q8NCW6 608 aa12.8□□□□□ -0.36
NUMB-209ENST00000554315 MYNNQ9NPC7 610 aa12.8□□□□□ -0.36
NUMB-209ENST00000554315 SLC35C2Q9NQQ7 365 aa12.8□□□□□ -0.36
NUMB-209ENST00000554315 TAS2R7Q9NYW3 318 aa12.8□□□□□ -0.36
NUMB-209ENST00000554315 ZNF223Q9UK11 482 aaPredicted RBP12.8□□□□□ -0.36
NUMB-209ENST00000554315 ENTPD4Q9Y227 616 aa12.8□□□□□ -0.36
NUMB-209ENST00000554315 BSNQ9UPA5 3926 aa12.8□□□□□ -0.36
NUMB-209ENST00000554315 ZNF462Q96JM2 2506 aa12.8□□□□□ -0.36
NUMB-209ENST00000554315 SP1P08047 785 aa12.79□□□□□ -0.36
NUMB-209ENST00000554315 H2AFXP16104 143 aaPredicted RBP12.79□□□□□ -0.36
NUMB-209ENST00000554315 RPL14P50914 215 aaKnown RBP12.79□□□□□ -0.36
NUMB-209ENST00000554315 ERVK-8P63133 956 aa12.79□□□□□ -0.36
NUMB-209ENST00000554315 ATP6AP1LQ52LC2 224 aa12.79□□□□□ -0.36
NUMB-209ENST00000554315 HLA-DQA1Q5Y7H0 255 aa12.79□□□□□ -0.36
NUMB-209ENST00000554315 SPINK14Q6IE38 97 aa12.79□□□□□ -0.36
NUMB-209ENST00000554315 OPN5Q6U736 354 aa12.79□□□□□ -0.36
NUMB-209ENST00000554315 LRRC25Q8N386 305 aaPredicted RBP12.79□□□□□ -0.36
NUMB-209ENST00000554315 BCORP1Q8N888 145 aa12.79□□□□□ -0.36
NUMB-209ENST00000554315 RAB3IL1Q8TBN0 382 aa12.79□□□□□ -0.36
NUMB-209ENST00000554315 AGR3Q8TD06 166 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms