RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 GSAPA4D1B5 854 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 A6NL46 340 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 MNX1P50219 401 aaPredicted RBP12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 SLAMF1Q13291 335 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 KIAA1161Q6NSJ0 714 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 GALNT13Q8IUC8 556 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 ZBTB8BQ8NAP8 495 aaPredicted RBP12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 KCT2Q8NC54 265 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 OR4D11Q8NGI4 311 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 SLC7A13Q8TCU3 470 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 SMPDL3AQ92484 453 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 TM4SF18Q96CE8 201 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 PRRG3Q9BZD7 231 aa12.96□□□□□ -0.33
PRPF40B-209ENST00000548825 ARHGAP33O14559 1287 aa12.96□□□□□ -0.34
PRPF40B-209ENST00000548825 SPINT1O43278 529 aa12.96□□□□□ -0.34
PRPF40B-209ENST00000548825 JUNDP17535 347 aa12.96□□□□□ -0.34
PRPF40B-209ENST00000548825 PRPH2P23942 346 aa12.96□□□□□ -0.34
PRPF40B-209ENST00000548825 AK4P27144 223 aaPredicted RBP12.96□□□□□ -0.34
PRPF40B-209ENST00000548825 CERS1P27544 350 aa12.96□□□□□ -0.34
PRPF40B-209ENST00000548825 LTB4RQ15722 352 aa12.96□□□□□ -0.34
PRPF40B-209ENST00000548825 ZMAT1Q5H9K5 638 aa12.96□□□□□ -0.34
PRPF40B-209ENST00000548825 RSBN1Q5VWQ0 802 aaPredicted RBP12.96□□□□□ -0.34
PRPF40B-209ENST00000548825 SLC7A5P1Q8MH63 180 aa12.96□□□□□ -0.34
PRPF40B-209ENST00000548825 CELF2-AS1Q8N7Q2 184 aa12.96□□□□□ -0.34
PRPF40B-209ENST00000548825 ZNF784Q8NCA9 323 aaPredicted RBP12.96□□□□□ -0.34
PRPF40B-209ENST00000548825 MAGEB10Q96LZ2 347 aaPredicted RBP12.96□□□□□ -0.34
PRPF40B-209ENST00000548825 TBC1D17Q9HA65 648 aa12.96□□□□□ -0.34
PRPF40B-209ENST00000548825 SPIN1Q9Y657 262 aaPredicted RBP12.96□□□□□ -0.34
PRPF40B-209ENST00000548825 TANC1Q9C0D5 1861 aa12.96□□□□□ -0.34
PRPF40B-209ENST00000548825 PLXND1Q9Y4D7 1925 aa12.96□□□□□ -0.34
PRPF40B-209ENST00000548825 TCF20Q9UGU0 1960 aaKnown RBP12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 C1QTNF3-AMACRE9PGA6 284 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 GNB5O14775 395 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 CAPN5O15484 640 aaPredicted RBP12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 RB1P06400 928 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 UQCRC2P22695 453 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 GSTM5P46439 218 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 TAS2R41P59536 307 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 DCDC1P59894 354 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 CDK3Q00526 305 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 RUNX1T1Q06455 604 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 GINS1Q14691 196 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 DESI1Q6ICB0 168 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 TANGO2Q6ICL3 276 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 NUDT13Q86X67 352 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 ZNF761Q86XN6 746 aaPredicted RBP12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 PARP16Q8N5Y8 322 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 OR52E4Q8NGH9 312 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 OR2L2Q8NH16 312 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 GATAD2BQ8WXI9 593 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 UBE2E3Q969T4 207 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 HHIPL1Q96JK4 782 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 LRR1Q96L50 414 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 TSSK6Q9BXA6 273 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 ASPNQ9BXN1 380 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 KCNE3Q9Y6H6 103 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 SERPINB7O75635 380 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 HMGN2P05204 90 aaKnown RBP12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 LRRC32Q14392 662 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 SLC35F1Q5T1Q4 408 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 ARMC4Q5T2S8 1044 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 C22orf42Q6IC83 251 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 MSANTD1Q6ZTZ1 278 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 USP43Q70EL4 1123 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 C7orf61Q8IZ16 206 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 MFSD4AQ8N468 514 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 KBTBD8Q8NFY9 601 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 GPR32P1Q8NGA4 272 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 ZBED6CLQ96FA7 236 aaPredicted RBP12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 ABHD8Q96I13 439 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 COQ10AQ96MF6 247 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 ZNF607Q96SK3 696 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 INSM2Q96T92 566 aaPredicted RBP12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 SAGE1Q9NXZ1 904 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 CLEC4AQ9UMR7 237 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 EDDM13A0A1B0GTR0 161 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 CLEC2LP0C7M8 214 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 ARAFP10398 606 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 DDCP20711 480 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 CD72P21854 359 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 FCHO2Q0JRZ9 810 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 OXA1LQ15070 435 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 ZNF542PQ5EBM4 170 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 ATAT1Q5SQI0 421 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 CCNJQ5T5M9 372 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 TCTN3Q6NUS6 607 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 CPA6Q8N4T0 437 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 OR6T1Q8NGN1 323 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 TM9SF2Q99805 663 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 INIPQ9NRY2 104 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 TBCCD1Q9NVR7 557 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 ATP6V1HQ9UI12 483 aa12.95□□□□□ -0.34
PRPF40B-209ENST00000548825 NPIPA5A0A0B4J1W7 369 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 NPIPA7E9PJI5 369 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 CDRT1O95170 752 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 APOA1P02647 267 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 NPIPA8P0DM63 369 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 RHCEP18577 417 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 RCVRNP35243 200 aa12.94□□□□□ -0.34
PRPF40B-209ENST00000548825 XCR1P46094 333 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms