RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 RIT1Q92963 219 aa13.19□□□□□ -0.3
TROAP-203ENST00000546735 REPS1Q96D71 796 aa13.19□□□□□ -0.3
TROAP-203ENST00000546735 SPACA9Q96E40 222 aaPredicted RBP13.19□□□□□ -0.3
TROAP-203ENST00000546735 PHF21BQ96EK2 531 aa13.19□□□□□ -0.3
TROAP-203ENST00000546735 ART5Q96L15 291 aa13.19□□□□□ -0.3
TROAP-203ENST00000546735 TREX2Q9BQ50 279 aaPredicted RBP13.19□□□□□ -0.3
TROAP-203ENST00000546735 LDAHQ9H6V9 325 aa13.19□□□□□ -0.3
TROAP-203ENST00000546735 EXO5Q9H790 373 aa13.19□□□□□ -0.3
TROAP-203ENST00000546735 DDX31Q9H8H2 851 aaKnown RBP13.19□□□□□ -0.3
TROAP-203ENST00000546735 PROK2Q9HC23 129 aa13.19□□□□□ -0.3
TROAP-203ENST00000546735 SH2D2AQ9NP31 389 aa13.19□□□□□ -0.3
TROAP-203ENST00000546735 LYARQ9NX58 379 aaKnown RBP13.19□□□□□ -0.3
TROAP-203ENST00000546735 ALKBH4Q9NXW9 302 aa13.19□□□□□ -0.3
TROAP-203ENST00000546735 ACAD8Q9UKU7 415 aa13.19□□□□□ -0.3
TROAP-203ENST00000546735 FAM215AQ9Y5M1 114 aa13.19□□□□□ -0.3
TROAP-203ENST00000546735 A0A1B0GVC2 190 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 AQP7O14520 342 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 BCKDKO14874 412 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 PGRMC2O15173 223 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 CLDN9O95484 217 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 GLI4P10075 376 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 ENDOUP21128 410 aaKnown RBP13.18□□□□□ -0.3
TROAP-203ENST00000546735 SSTR4P31391 388 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 PHBP35232 272 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 SLC37A1P57057 533 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 KCNJ2P63252 427 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 CKAP4Q07065 602 aaKnown RBP13.18□□□□□ -0.3
TROAP-203ENST00000546735 BIKQ13323 160 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 CUL3Q13618 768 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 SLC10A1Q14973 349 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 HYAL4Q2M3T9 481 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 SPRED3Q2MJR0 410 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 ACAD11Q709F0 780 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 RPS27LQ71UM5 84 aaKnown RBP13.18□□□□□ -0.3
TROAP-203ENST00000546735 SLC29A4Q7RTT9 530 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 CCDC91Q7Z6B0 441 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 C7orf57Q8NEG2 295 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 ATP6V1E2Q96A05 226 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 JSRP1Q96MG2 331 aaPredicted RBP13.18□□□□□ -0.3
TROAP-203ENST00000546735 NSUN5Q96P11 429 aaKnown RBP13.18□□□□□ -0.3
TROAP-203ENST00000546735 TTYH2Q9BSA4 534 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 WWTR1Q9GZV5 400 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 CDC42EP4Q9H3Q1 356 aaKnown RBP13.18□□□□□ -0.3
TROAP-203ENST00000546735 ACSS3Q9H6R3 686 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 MCCC2Q9HCC0 563 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 ZBTB26Q9HCK0 441 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 KCNJ16Q9NPI9 418 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 TEX10Q9NXF1 929 aaPredicted RBP13.18□□□□□ -0.3
TROAP-203ENST00000546735 SPRR3Q9UBC9 169 aa13.18□□□□□ -0.3
TROAP-203ENST00000546735 TNPO3Q9Y5L0 923 aaKnown RBP13.18□□□□□ -0.3
TROAP-203ENST00000546735 TRGV5A0A0B4J1U4 118 aa13.17□□□□□ -0.3
TROAP-203ENST00000546735 OR14I1A6ND48 311 aa13.17□□□□□ -0.3
TROAP-203ENST00000546735 LRRC3CA6NJW4 275 aa13.17□□□□□ -0.3
TROAP-203ENST00000546735 FIGNL2A6NMB9 653 aa13.17□□□□□ -0.3
TROAP-203ENST00000546735 UGDHO60701 494 aa13.17□□□□□ -0.3
TROAP-203ENST00000546735 ACSL3O95573 720 aa13.17□□□□□ -0.3
TROAP-203ENST00000546735 FBXO45P0C2W1 286 aa13.17□□□□□ -0.3
TROAP-203ENST00000546735 CT62P0C5K7 136 aa13.17□□□□□ -0.3
TROAP-203ENST00000546735 IGFBP2P18065 325 aa13.17□□□□□ -0.3
TROAP-203ENST00000546735 MSX1P28360 303 aa13.17□□□□□ -0.3
TROAP-203ENST00000546735 ARFIP1P53367 373 aa13.17□□□□□ -0.3
TROAP-203ENST00000546735 SGO1Q5FBB7 561 aa13.17□□□□□ -0.3
TROAP-203ENST00000546735 B3GNT6Q6ZMB0 384 aa13.17□□□□□ -0.3
TROAP-203ENST00000546735 LIX1LQ8IVB5 337 aa13.17□□□□□ -0.3
TROAP-203ENST00000546735 UHMK1Q8TAS1 419 aaKnown RBP13.17□□□□□ -0.3
TROAP-203ENST00000546735 PELOQ9BRX2 385 aaKnown RBP13.17□□□□□ -0.3
TROAP-203ENST00000546735 SLC6A15Q9H2J7 730 aa13.17□□□□□ -0.3
TROAP-203ENST00000546735 ZNF703Q9H7S9 590 aaPredicted RBP13.17□□□□□ -0.3
TROAP-203ENST00000546735 WDR41Q9HAD4 459 aa13.17□□□□□ -0.3
TROAP-203ENST00000546735 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.17□□□□□ -0.3
TROAP-203ENST00000546735 XPR1Q9UBH6 696 aa13.17□□□□□ -0.3
TROAP-203ENST00000546735 CNOT11Q9UKZ1 510 aaKnown RBP13.17□□□□□ -0.3
TROAP-203ENST00000546735 CHCHD2Q9Y6H1 151 aaPredicted RBP13.17□□□□□ -0.3
TROAP-203ENST00000546735 ZNF407Q9C0G0 2248 aa13.17□□□□□ -0.3
TROAP-203ENST00000546735 OTOGQ6ZRI0 2925 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 EML6Q6ZMW3 1958 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 A0A0G2JNJ9 132 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 A0A1B0GTL3 188 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 C2orf92A0A1B0GVN3 265 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 CCDC189A1A4V9 331 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 FOXE1O00358 373 aaPredicted RBP13.16□□□□□ -0.3
TROAP-203ENST00000546735 URI1O94763 535 aaPredicted RBP13.16□□□□□ -0.3
TROAP-203ENST00000546735 KLK1P06870 262 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 SLC35E2P0CK97 266 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 SERPINB3P29508 390 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 ADH7P40394 386 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 TRPC1P48995 793 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 CCNG1P51959 295 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 C1orf185Q5T7R7 199 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 WLSQ5T9L3 541 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 FRG2Q64ET8 278 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 BICRALQ6AI39 1079 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 TTC19Q6DKK2 380 aaPredicted RBP13.16□□□□□ -0.3
TROAP-203ENST00000546735 CDH24Q86UP0 819 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 FBXW8Q8N3Y1 598 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 SLC15A4Q8N697 577 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 SLC44A1Q8WWI5 657 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 SARAFQ96BY9 339 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 FRG2BQ96QU4 278 aa13.16□□□□□ -0.3
TROAP-203ENST00000546735 PAFAH2Q99487 392 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms