RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 DYRK3O43781 588 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 DLX3O60479 287 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 MYO1DO94832 1006 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 SEMA3DO95025 777 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 KRT6AP02538 564 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 KRT6BP04259 564 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 MYL2P10916 166 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 CRHR1P34998 444 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 KRT6CP48668 564 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 TNFSF10P50591 281 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 HNRNPFP52597 415 aaKnown RBP6.88□□□□□ -1.31
CPSF7-224ENST00000544990 PRKAA2P54646 552 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 TRAF3Q13114 568 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 ELAVL1Q15717 326 aaKnown RBP6.88□□□□□ -1.31
CPSF7-224ENST00000544990 UNC50Q53HI1 259 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 FCRLBQ6BAA4 426 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 FAM180AQ6UWF9 173 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 PAGE2Q7Z2X7 111 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 CLNKQ7Z7G1 428 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 NUDT13Q86X67 352 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 CRLF3Q8IUI8 442 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 LGI4Q8N135 537 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 ARMC10Q8N2F6 343 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 HORMAD2Q8N7B1 307 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 CCDC63Q8NA47 563 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 TMEM52Q8NDY8 209 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 RDH11Q8TC12 318 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 TRPC4APQ8TEL6 797 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 SELENOMQ8WWX9 145 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 TANKQ92844 425 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 L3HYPDHQ96EM0 354 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 VMP1Q96GC9 406 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 RBM18Q96H35 190 aaKnown RBP6.88□□□□□ -1.31
CPSF7-224ENST00000544990 CSF3RQ99062 836 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 UTP23Q9BRU9 249 aaKnown RBP6.88□□□□□ -1.31
CPSF7-224ENST00000544990 ALOXE3Q9BYJ1 711 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 ROPN1BQ9BZX4 212 aaPredicted RBP6.88□□□□□ -1.31
CPSF7-224ENST00000544990 IQCGQ9H095 443 aaKnown RBP6.88□□□□□ -1.31
CPSF7-224ENST00000544990 CDCP1Q9H5V8 836 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 RPF2Q9H7B2 306 aaKnown RBP6.88□□□□□ -1.31
CPSF7-224ENST00000544990 DDX31Q9H8H2 851 aaKnown RBP6.88□□□□□ -1.31
CPSF7-224ENST00000544990 ROPN1Q9HAT0 212 aaPredicted RBP6.88□□□□□ -1.31
CPSF7-224ENST00000544990 ASF1BQ9NVP2 202 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 STOML1Q9UBI4 398 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 TRPS1Q9UHF7 1281 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 MID2Q9UJV3 735 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 ADAM29Q9UKF5 820 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 PCDHB10Q9UN67 800 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 MAST4O15021 2626 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 SHANK1Q9Y566 2161 aa6.88□□□□□ -1.31
CPSF7-224ENST00000544990 CFAP46Q8IYW2 2715 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 BOD1L1Q8NFC6 3051 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 A0A0A6YYD5 115 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 GABRR3A8MPY1 467 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 H3BQF6 201 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 PPP6CO00743 305 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 PROM1O43490 865 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 PRAMEF2O60811 474 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 LDB3O75112 727 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 GUCY1B2O75343 617 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 ULK1O75385 1050 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 ZFAND5O76080 213 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 UBOX5O94941 541 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 OR4F21O95013 312 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 F10P00742 488 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 PDYNP01213 254 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 TP53P04637 393 aaPredicted RBP6.87□□□□□ -1.31
CPSF7-224ENST00000544990 TUBBP07437 444 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 NUDT17P0C025 328 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 FAM58BPP0C7Q3 252 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 HSD3B1P14060 373 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 COX7A2P14406 83 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 KRT4P19013 534 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 TSPAN8P19075 237 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 HSD3B2P26439 372 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 HMOX2P30519 316 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 BSGP35613 385 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 PKNOX1P55347 436 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 TNFRSF17Q02223 184 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 OC90Q02509 493 aaPredicted RBP6.87□□□□□ -1.31
CPSF7-224ENST00000544990 INAQ16352 499 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 ERCC6LQ2NKX8 1250 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 PRR30Q53SZ7 412 aaPredicted RBP6.87□□□□□ -1.31
CPSF7-224ENST00000544990 SGO1Q5FBB7 561 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 CFAP157Q5JU67 520 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 MRM1Q6IN84 353 aaKnown RBP6.87□□□□□ -1.31
CPSF7-224ENST00000544990 ZYG11AQ6WRX3 759 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 SH2D5Q6ZV89 423 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 GPRIN3Q6ZVF9 776 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 RPS27LQ71UM5 84 aaKnown RBP6.87□□□□□ -1.31
CPSF7-224ENST00000544990 CDH24Q86UP0 819 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 CD163Q86VB7 1156 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 BEST3Q8N1M1 668 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 KIF2BQ8N4N8 673 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 CCNYL1Q8N7R7 359 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 BCORP1Q8N888 145 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 CDYL2Q8N8U2 506 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 MORN4Q8NDC4 146 aa6.87□□□□□ -1.31
CPSF7-224ENST00000544990 NFAM1Q8NET5 270 aaPredicted RBP6.87□□□□□ -1.31
CPSF7-224ENST00000544990 OR14A16Q8NHC5 309 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms