RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 ZDHHC4Q9NPG8 344 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 DYRK4Q9NR20 520 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 C5AR2Q9P296 337 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 TEKT2Q9UIF3 430 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 PLXND1Q9Y4D7 1925 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 TRBV4-1A0A0J9YWV2 114 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 FABP12A6NFH5 140 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 FOXE1O00358 373 aaPredicted RBP11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 QSOX1O00391 747 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 ADAMDEC1O15204 470 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 ICMTO60725 284 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 CCNB2O95067 398 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 GADD45GO95257 159 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 EIF2S1P05198 315 aaKnown RBP11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 GABRB1P18505 474 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 NNMTP40261 264 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 SLC6A11P48066 632 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 MICAQ29983 383 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 PDZK1Q5T2W1 519 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 OR2G6Q5TZ20 316 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 SDE2Q6IQ49 451 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 TCEANCQ8N8B7 351 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 RAB8BQ92930 207 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 CRISPLD2Q9H0B8 497 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 CXXC1Q9P0U4 656 aaPredicted RBP11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 TCF20Q9UGU0 1960 aaKnown RBP11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 MTCL1Q9Y4B5 1905 aaKnown RBP11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 SH3BP5O60239 455 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 MMP20O60882 483 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 GPR37L1O60883 481 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 MYL9P24844 172 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 ACADLP28330 430 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 RUNX1T1Q06455 604 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 TNFAIP8L2Q6P589 184 aaPredicted RBP11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 C11orf96Q7Z7L8 435 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 ELMOD2Q8IZ81 293 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 YIPF7Q8N8F6 280 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 OR52N2Q8NGI0 321 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 OR9A1PQ8NGU1 263 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 OR5H6Q8NGV6 325 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 PIK3R3Q92569 461 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 ZDHHC5Q9C0B5 715 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 SLC6A16Q9GZN6 736 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 NXF2Q9GZY0 626 aaKnown RBP11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 TVP23BQ9NYZ1 205 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 MAT2BQ9NZL9 334 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 TAAR2Q9P1P5 351 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 NLKQ9UBE8 527 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 CFL2Q9Y281 166 aa11.93□□□□□ -0.5
SFSWAP-208ENST00000539506 TRANK1O15050 2925 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 SCO2O43819 266 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 CSO75390 466 aaKnown RBP11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 IL3P08700 152 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 GPC1P35052 558 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 KIR2DL3P43628 341 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 DGKGP49619 791 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 MAN2A2P49641 1150 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 TEAD4Q15561 434 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 NXPE4Q6UWF7 544 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 TRMT11Q7Z4G4 463 aaKnown RBP11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 ADGRF3Q8IZF5 1079 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 FBXO15Q8NCQ5 510 aaPredicted RBP11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 ATP6V1C2Q8NEY4 427 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 SLC5A11Q8WWX8 675 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 C1GALT1C1Q96EU7 318 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 ACAT2Q9BWD1 397 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 NMNAT1Q9HAN9 279 aaPredicted RBP11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 SLAMF7Q9NQ25 335 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 ACER3Q9NUN7 267 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 CORO2BQ9UQ03 480 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 SNX11Q9Y5W9 270 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 IRAK3Q9Y616 596 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 SPEGQ15772 3267 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 RTCAO00442 366 aaKnown RBP11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 NTN1O95631 604 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 HBQ1P09105 142 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 PPIBP23284 216 aaKnown RBP11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 SDC2P34741 201 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 CHI3L1P36222 383 aaPredicted RBP11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 LIMS1P48059 325 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 CDC42P60953 191 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 HTRA4P83105 476 aaPredicted RBP11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 GPAT3Q53EU6 434 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 GCNT6Q5T4J0 391 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 TIGD4Q8IY51 512 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 NRSN1Q8IZ57 195 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 PLA2G15Q8NCC3 412 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 OR5AR1Q8NGP9 310 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 SLC7A6Q92536 515 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 PPCDCQ96CD2 204 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 FKBP14Q9NWM8 211 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 SAGE1Q9NXZ1 904 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 CCDC59Q9P031 241 aaKnown RBP11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 NUMA1Q14980 2115 aa11.92□□□□□ -0.5
SFSWAP-208ENST00000539506 SEMA7AO75326 666 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 POP7O75817 140 aaKnown RBP11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 C6P13671 934 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 VIPR2P41587 438 aa11.91□□□□□ -0.5
SFSWAP-208ENST00000539506 PXNP49023 591 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms