RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 OR10T2Q8NGX3 314 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 BMFQ96LC9 184 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 RANBP9Q96S59 729 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 TUBA1CQ9BQE3 449 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 HERPUD2Q9BSE4 406 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 HSD3B7Q9H2F3 369 aa17.39■□□□□ 0.37
SFSWAP-203ENST00000535236 H7C417 338 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 SEMA4FO95754 770 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 ERCC1P07992 297 aaPredicted RBP17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 SLC26A5P58743 744 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 HHEXQ03014 270 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 GRM7Q14831 915 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 ZNF367Q7RTV3 350 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 SLC22A16Q86VW1 577 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 IGDCC3Q8IVU1 814 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 NSUN5Q96P11 429 aaKnown RBP17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 A0A0G2JPF8 293 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 HNRNPCL3B7ZW38 293 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 RFPL2O75678 378 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 GKN3PP0CG01 181 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 HNRNPCL4P0DMR1 293 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 CELP19835 753 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 CFL1P23528 166 aaKnown RBP17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 GNMTQ14749 295 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 RHEBQ15382 184 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 NLGN4XQ8N0W4 816 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 SAMD12Q8N8I0 201 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 OR13C3Q8NGS6 347 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 H3BSA7 217 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 PLATP00750 562 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 IFNA2P01563 188 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 KIAA0895LQ68EN5 471 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 DCDC5Q6ZRR9 648 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 HOXB13Q92826 284 aaPredicted RBP17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 PCYT2Q99447 389 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 BEX2Q9BXY8 128 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 FBRSQ9HAH7 460 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 BEX1Q9HBH7 125 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 SFTPBP07988 381 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 VIPR2P41587 438 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 RABIFP47224 123 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 HK3P52790 923 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 POU4F2Q12837 409 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 VMACQ2NL98 169 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 GTF2IRD2BQ6EKJ0 949 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 SLC39A5Q6ZMH5 540 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 C6orf120Q7Z4R8 191 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 HMGN2P46Q86SG4 172 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 GALNT10Q86SR1 603 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 GTF2IRD2Q86UP8 949 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 PEX11GQ96HA9 241 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 FCRL3Q96P31 734 aaPredicted RBP17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 SLC6A7Q99884 636 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 RXFP3Q9NSD7 469 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 ICKQ9UPZ9 632 aa17.38■□□□□ 0.37
SFSWAP-203ENST00000535236 ARSFP54793 590 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 DOC2AQ14183 400 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 ATXN7L3Q14CW9 347 aaPredicted RBP17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 TECRLQ5HYJ1 363 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 FAM210AQ96ND0 272 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 SLCO3A1Q9UIG8 710 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 SOX4Q06945 474 aaPredicted RBP17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 TMEM151BQ8IW70 566 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 IL17RCQ8NAC3 791 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 ASB15Q8WXK1 588 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 TM9SF4Q92544 642 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 SLC17A9Q9BYT1 436 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 EXTL2Q9UBQ6 330 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 KCNN3Q9UGI6 736 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 CCRL2O00421 344 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 AURKAO14965 403 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 THEGLP0DJG4 465 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 LCN1P31025 176 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 BMPR1AP36894 532 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 RIDAP52758 137 aaKnown RBP17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 GPRIN1Q7Z2K8 1008 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 ZNF675Q8TD23 568 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 SPRYD4Q8WW59 207 aaPredicted RBP17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 VRTNQ9H8Y1 702 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 ATXN7L1Q9ULK2 861 aaPredicted RBP17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 SPEF1Q9Y4P9 236 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 RBBP9O75884 186 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 THBS2P35442 1172 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 GCGRP47871 477 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 NSDHLQ15738 373 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 PSAPL1Q6NUJ1 521 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 FIGNL1Q6PIW4 674 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 C12orf43Q96C57 262 aaKnown RBP17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 PITX2Q99697 317 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 MYNNQ9NPC7 610 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 BORCS7-ASMTA0A0B4J1R7 106 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 GGT3PA6NGU5 568 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 SDC3O75056 442 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 ZNF623O75123 536 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 FGF3P11487 239 aaPredicted RBP17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 IST1P53990 364 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 UGT8Q16880 541 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 DOK4Q8TEW6 326 aa17.37■□□□□ 0.37
SFSWAP-203ENST00000535236 ASB12Q8WXK4 309 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms