RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 COLEC10Q9Y6Z7 277 aa3.91□□□□□ -1.78
AC055878.1-201ENST00000531858 ATP10DQ9P241 1426 aa3.9□□□□□ -1.78
AC055878.1-201ENST00000531858 TRBV5-5A0A0J9YX44 114 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 ESYT2A0FGR8 921 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 METTL21EPA6NDL7 271 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 NKX6-3A6NJ46 265 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 WASHC1A8K0Z3 465 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 MGST3O14880 152 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 CETN3O15182 167 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 SPRY3O43610 288 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 TSPAN2O60636 221 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 BCAR3O75815 825 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 FLOT1O75955 427 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 KRT36O76013 467 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 CAVIN2O95810 425 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 VTNP04004 478 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 KRT19P08727 400 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 CCDC172P0C7W6 258 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 MSH3P20585 1137 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 PRKACBP22694 351 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 OTX1P32242 354 aaPredicted RBP3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 LONP1P36776 959 aaKnown RBP3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 CCT3P49368 545 aaKnown RBP3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 RAB9AP51151 201 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 OSTNP61366 133 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 MYL7Q01449 175 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 NAAAQ02083 359 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 TFF2Q03403 129 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 SLC10A2Q12908 348 aaPredicted RBP3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 TRAF2Q12933 501 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 BNIP1Q12981 228 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 ENPP2Q13822 863 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 HNF4GQ14541 408 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 ELAVL3Q14576 367 aaKnown RBP3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 HERC3Q15034 1050 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 SYPL1Q16563 259 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 CALCRLQ16602 461 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 CLPPQ16740 277 aaPredicted RBP3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 SGSM1Q2NKQ1 1148 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 C6orf226Q5I0X4 101 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 PIP5KL1Q5T9C9 394 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 HECTD2Q5U5R9 776 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 LYPLAL1Q5VWZ2 237 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 TMEM184AQ6ZMB5 413 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 ASB18Q6ZVZ8 466 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 RFPL4BQ6ZWI9 263 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 SPATA24Q86W54 205 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 PALM2Q8IXS6 379 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 CLIP4Q8N3C7 705 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 FAM89BQ8N5H3 189 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 CLDN19Q8N6F1 224 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 RBMXL3Q8N7X1 1067 aaKnown RBP3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 CCDC197Q8NCU1 140 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 NFAM1Q8NET5 270 aaPredicted RBP3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 BPIFCQ8NFQ6 507 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 GRHL3Q8TE85 626 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 HSD17B8Q92506 261 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 LARP4BQ92615 738 aaKnown RBP3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 MYLPFQ96A32 169 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 NRBF2Q96F24 287 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 IGSF21Q96ID5 467 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 ATP6V1G3Q96LB4 118 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 LURAP1Q96LR2 239 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 TSNARE1Q96NA8 513 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 RPRD1AQ96P16 312 aaPredicted RBP3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 TGM7Q96PF1 710 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 WWP1Q9H0M0 922 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 MTIF3Q9H2K0 278 aaKnown RBP3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 CPVLQ9H3G5 476 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 SMYD3Q9H7B4 428 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 TMEM185BQ9H7F4 350 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 ZNF665Q9H7R5 613 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 KCNK13Q9HB14 408 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 PLAC1Q9HBJ0 212 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 SLC52A3Q9NQ40 469 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 MED17Q9NVC6 651 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 TECRQ9NZ01 308 aaKnown RBP3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 WNT16Q9UBV4 365 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 ST6GALNAC2Q9UJ37 374 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 PILRBQ9UKJ0 227 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 ZNF346Q9UL40 294 aaKnown RBP3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 GSTK1Q9Y2Q3 226 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 ZNF175Q9Y473 711 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 NPTNQ9Y639 398 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 MAP3K19Q56UN5 1328 aa3.9□□□□□ -1.79
AC055878.1-201ENST00000531858 A0A0J9YYE9 177 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 A0A1W2PPC1 479 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 C5orf60A6NFR6 353 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 OTOL1A6NHN0 477 aaPredicted RBP3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 PROB1E7EW31 1015 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 PRR23D1E9PI22 279 aaPredicted RBP3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 K7ESM1 405 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 OVOL3O00110 214 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 MID1O15344 667 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 YKT6O15498 198 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 KCNAB3O43448 404 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 CHMP2AO43633 222 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 NMT2O60551 498 aa3.89□□□□□ -1.79
AC055878.1-201ENST00000531858 UPK3AO75631 287 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms