RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 CLCNKAP51800 687 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 RAB8AP61006 207 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 SNAP47Q5SQN1 464 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 MZT2AQ6P582 158 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 NUDT13Q86X67 352 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 ATP6V1C2Q8NEY4 427 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.78□□□□□ -0.688e-29■■■■■ 62
NXF1-211ENST00000531709 DOK4Q8TEW6 326 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 SUSD6Q92537 303 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 COQ8BQ96D53 544 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 ALG14Q96F25 216 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 NECTIN4Q96NY8 510 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 PITX2Q99697 317 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 GABARAPL3Q9BY60 117 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 CXorf36Q9H7Y0 433 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 RANGRFQ9HD47 186 aaPredicted RBP10.78□□□□□ -0.68
NXF1-211ENST00000531709 KLHL42Q9P2K6 505 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 FAM170BA6NMN3 283 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 LATO43561 262 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 SMSP52788 366 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 FAM20CQ8IXL6 584 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 Q8N402 240 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 OR51I1Q9H343 314 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 SPHK2Q9NRA0 654 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 MUTYHQ9UIF7 546 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 HSPB11Q9Y547 144 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 MYO16Q9Y6X6 1858 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 SDK1Q7Z5N4 2213 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 ISM1B1AKI9 464 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 PLD2O14939 933 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 ABLIM3O94929 683 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 C1orf105O95561 183 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 RAB36O95755 333 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 TIMP2P16035 220 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 NPPBP16860 134 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 CST5P28325 142 aaPredicted RBP10.78□□□□□ -0.68
NXF1-211ENST00000531709 MAPK9P45984 424 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 CDH11P55287 796 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 HOXC5Q00444 222 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 SLC35F1Q5T1Q4 408 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 FAM46CQ5VWP2 391 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 HTR3DQ70Z44 454 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 SMPDL3AQ92484 453 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 ECHDC3Q96DC8 303 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 OMA1Q96E52 524 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 TCEAL4Q96EI5 215 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 TRMT2BQ96GJ1 504 aaKnown RBP10.78□□□□□ -0.68
NXF1-211ENST00000531709 ABCG4Q9H172 646 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 OR51V1Q9H2C8 321 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 QPCTLQ9NXS2 382 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 CNIH4Q9P003 139 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 PCDHGA3Q9Y5H0 932 aa10.78□□□□□ -0.68
NXF1-211ENST00000531709 A0A1B0GVC2 190 aa10.77□□□□□ -0.68
NXF1-211ENST00000531709 A6NIN4 97 aa10.77□□□□□ -0.68
NXF1-211ENST00000531709 FAAHO00519 579 aa10.77□□□□□ -0.68
NXF1-211ENST00000531709 ERI3O43414 337 aaKnown RBP10.77□□□□□ -0.68
NXF1-211ENST00000531709 SCN2BO60939 215 aa10.77□□□□□ -0.68
NXF1-211ENST00000531709 EPHX1P07099 455 aa10.77□□□□□ -0.68
NXF1-211ENST00000531709 KELP23276 732 aa10.77□□□□□ -0.68
NXF1-211ENST00000531709 NTHL1P78549 312 aa10.77□□□□□ -0.68
NXF1-211ENST00000531709 NXNL2Q5VZ03 156 aa10.77□□□□□ -0.68
NXF1-211ENST00000531709 CDC73Q6P1J9 531 aa10.77□□□□□ -0.68
NXF1-211ENST00000531709 BHLHB9Q6PI77 547 aa10.77□□□□□ -0.68
NXF1-211ENST00000531709 PAMR1Q6UXH9 720 aa10.77□□□□□ -0.68
NXF1-211ENST00000531709 LUZP2Q86TE4 346 aa10.77□□□□□ -0.68
NXF1-211ENST00000531709 TCEAL8Q8IYN2 117 aa10.77□□□□□ -0.68
NXF1-211ENST00000531709 ADAMTS15Q8TE58 950 aa10.77□□□□□ -0.68
NXF1-211ENST00000531709 OR8D1Q8WZ84 308 aa10.77□□□□□ -0.68
NXF1-211ENST00000531709 CTRCQ99895 268 aa10.77□□□□□ -0.68
NXF1-211ENST00000531709 QRSL1Q9H0R6 528 aaKnown RBP10.77□□□□□ -0.68
NXF1-211ENST00000531709 YARS2Q9Y2Z4 477 aaKnown RBP10.77□□□□□ -0.68
NXF1-211ENST00000531709 CCDC88CQ9P219 2028 aa10.77□□□□□ -0.68
NXF1-211ENST00000531709 CD8B2A6NJW9 211 aa10.77□□□□□ -0.69
NXF1-211ENST00000531709 SLCO2B1O94956 709 aa10.77□□□□□ -0.69
NXF1-211ENST00000531709 CD8BP10966 210 aa10.77□□□□□ -0.69
NXF1-211ENST00000531709 CCR8P51685 355 aa10.77□□□□□ -0.69
NXF1-211ENST00000531709 ZNF311Q5JNZ3 666 aa10.77□□□□□ -0.69
NXF1-211ENST00000531709 OR8H1Q8NGG4 311 aa10.77□□□□□ -0.69
NXF1-211ENST00000531709 C11orf24Q96F05 449 aaPredicted RBP10.77□□□□□ -0.69
NXF1-211ENST00000531709 SPRTNQ9H040 489 aaPredicted RBP10.77□□□□□ -0.69
NXF1-211ENST00000531709 NEUROD4Q9HD90 331 aa10.77□□□□□ -0.69
NXF1-211ENST00000531709 CSO75390 466 aaKnown RBP10.77□□□□□ -0.69
NXF1-211ENST00000531709 PRNPP04156 253 aa10.77□□□□□ -0.69
NXF1-211ENST00000531709 ARAFP10398 606 aa10.77□□□□□ -0.69
NXF1-211ENST00000531709 ACP5P13686 325 aa10.77□□□□□ -0.69
NXF1-211ENST00000531709 BMP7P18075 431 aa10.77□□□□□ -0.69
NXF1-211ENST00000531709 PSMB5P28074 263 aa10.77□□□□□ -0.69
NXF1-211ENST00000531709 TAP2Q03519 686 aa10.77□□□□□ -0.69
NXF1-211ENST00000531709 HSDL2Q6YN16 418 aa10.77□□□□□ -0.69
NXF1-211ENST00000531709 FAM129CQ86XR2 697 aa10.77□□□□□ -0.69
NXF1-211ENST00000531709 OR5P2Q8WZ92 322 aa10.77□□□□□ -0.69
NXF1-211ENST00000531709 ZNF689Q96CS4 500 aaPredicted RBP10.77□□□□□ -0.69
NXF1-211ENST00000531709 C12orf66Q96MD2 445 aa10.77□□□□□ -0.69
NXF1-211ENST00000531709 ZFP3Q96NJ6 502 aa10.77□□□□□ -0.69
NXF1-211ENST00000531709 FYTTD1Q96QD9 318 aaKnown RBP10.77□□□□□ -0.69
NXF1-211ENST00000531709 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.77□□□□□ -0.69
NXF1-211ENST00000531709 HS3ST2Q9Y278 367 aa10.77□□□□□ -0.69
NXF1-211ENST00000531709 GPSM3Q9Y4H4 160 aa10.77□□□□□ -0.69
NXF1-211ENST00000531709 C2orf92A0A1B0GVN3 265 aa10.77□□□□□ -0.69
NXF1-211ENST00000531709 FAM172BPA6NC97 362 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms