RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 ALOXE3Q9BYJ1 711 aa11.4□□□□□ -0.59
TRAF3IP2-211ENST00000528599 BHLHE41Q9C0J9 482 aaPredicted RBP11.4□□□□□ -0.59
TRAF3IP2-211ENST00000528599 ATAD3AQ9NVI7 634 aa11.4□□□□□ -0.59
TRAF3IP2-211ENST00000528599 C3orf18Q9UK00 162 aa11.4□□□□□ -0.59
TRAF3IP2-211ENST00000528599 TCFL5Q9UL49 500 aa11.4□□□□□ -0.59
TRAF3IP2-211ENST00000528599 ZMIZ1Q9ULJ6 1067 aa11.4□□□□□ -0.59
TRAF3IP2-211ENST00000528599 FARSAQ9Y285 508 aaKnown RBP11.4□□□□□ -0.59
TRAF3IP2-211ENST00000528599 ZNF780BQ9Y6R6 833 aa11.4□□□□□ -0.59
TRAF3IP2-211ENST00000528599 LOC100653049A0A140TA62 436 aa11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 C21orf140B9A014 251 aa11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 PDPK1O15530 556 aa11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 KRT34O76011 436 aa11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 IL6P05231 212 aa11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 SNRPB2P08579 225 aaKnown RBP11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 CD63P08962 238 aa11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 CPMP14384 443 aa11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 CSNK2A2P19784 350 aaPredicted RBP11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 RPS15P62841 145 aaKnown RBP11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 ELF3P78545 371 aaPredicted RBP11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 STX4Q12846 297 aa11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 TLR1Q15399 786 aa11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 NSDHLQ15738 373 aa11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 CEBPEQ15744 281 aa11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 CROCCQ5TZA2 2017 aa11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 LANCL3Q6ZV70 420 aa11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 SNX32Q86XE0 403 aa11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 CCDC116Q8IYX3 515 aa11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 POU5F2Q8N7G0 328 aa11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 SUN3Q8TAQ9 357 aa11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 PPWD1Q96BP3 646 aaKnown RBP11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 SLC7A6OSQ96CW6 309 aaPredicted RBP11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 NSL1Q96IY1 281 aa11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 RAB3IPQ96QF0 476 aaPredicted RBP11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 BBS4Q96RK4 519 aa11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 GPR87Q9BY21 358 aa11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 ARL8BQ9NVJ2 186 aa11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 IL17BQ9UHF5 180 aa11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 ERVK-11Q9UQG0 969 aa11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 RAXQ9Y2V3 346 aa11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 URB1O60287 2271 aaKnown RBP11.39□□□□□ -0.59
TRAF3IP2-211ENST00000528599 A0A1W2PP18 115 aa11.38□□□□□ -0.59
TRAF3IP2-211ENST00000528599 TCRBV16S1A1N1A0A5B0 115 aa11.38□□□□□ -0.59
TRAF3IP2-211ENST00000528599 CCDC154A6NI56 674 aa11.38□□□□□ -0.59
TRAF3IP2-211ENST00000528599 ALOX12BO75342 701 aa11.38□□□□□ -0.59
TRAF3IP2-211ENST00000528599 SLC35E2P0CK97 266 aa11.38□□□□□ -0.59
TRAF3IP2-211ENST00000528599 COX4I1P13073 169 aa11.38□□□□□ -0.59
TRAF3IP2-211ENST00000528599 PORP16435 677 aaPredicted RBP11.38□□□□□ -0.59
TRAF3IP2-211ENST00000528599 CALB2P22676 271 aa11.38□□□□□ -0.59
TRAF3IP2-211ENST00000528599 PTPN4P29074 926 aa11.38□□□□□ -0.59
TRAF3IP2-211ENST00000528599 FOLR3P41439 243 aa11.38□□□□□ -0.59
TRAF3IP2-211ENST00000528599 FBXW10Q5XX13 1052 aa11.38□□□□□ -0.59
TRAF3IP2-211ENST00000528599 CPZQ66K79 652 aa11.38□□□□□ -0.59
TRAF3IP2-211ENST00000528599 SLC2A7Q6PXP3 512 aa11.38□□□□□ -0.59
TRAF3IP2-211ENST00000528599 DGAT2L6Q6ZPD8 337 aa11.38□□□□□ -0.59
TRAF3IP2-211ENST00000528599 ZNF551Q7Z340 670 aaPredicted RBP11.38□□□□□ -0.59
TRAF3IP2-211ENST00000528599 PACS2Q86VP3 889 aa11.38□□□□□ -0.59
TRAF3IP2-211ENST00000528599 ANKRD46Q86W74 232 aa11.38□□□□□ -0.59
TRAF3IP2-211ENST00000528599 CLECL1Q8IZS7 167 aa11.38□□□□□ -0.59
TRAF3IP2-211ENST00000528599 AMDHD1Q96NU7 426 aa11.38□□□□□ -0.59
TRAF3IP2-211ENST00000528599 GLIPR2Q9H4G4 154 aa11.38□□□□□ -0.59
TRAF3IP2-211ENST00000528599 GIMAP4Q9NUV9 329 aa11.38□□□□□ -0.59
TRAF3IP2-211ENST00000528599 FAM120CQ9NX05 1096 aaKnown RBP11.38□□□□□ -0.59
TRAF3IP2-211ENST00000528599 ENTPD4Q9Y227 616 aa11.38□□□□□ -0.59
TRAF3IP2-211ENST00000528599 PADI2Q9Y2J8 665 aa11.38□□□□□ -0.59
TRAF3IP2-211ENST00000528599 MRPS18BQ9Y676 258 aaKnown RBP11.38□□□□□ -0.59
TRAF3IP2-211ENST00000528599 PRSS51A0A1B0GVH4 220 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 A0A1W2PRB8 838 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 FBP2O00757 339 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 CFLARO15519 480 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 C6orf47O95873 294 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 DDX5P17844 614 aaKnown RBP11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 NTSP30990 170 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 STT3AP46977 705 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 NCBP2P52298 156 aaKnown RBP eCLIP11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 KCNJ2P63252 427 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 PLIN5Q00G26 463 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 SRSF6Q13247 344 aaKnown RBP11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 CLN3Q13286 438 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 CYLC2Q14093 348 aaPredicted RBP11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 SERTAD2Q14140 314 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 LTB4RQ15722 352 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 PAGE3Q5JUK9 113 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 ANXA8L1Q5VT79 327 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 TMEM205Q6UW68 189 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 ANKRD37Q7Z713 158 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 VASH2Q86V25 355 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 RETREG3Q86VR2 466 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 SAMD14Q8IZD0 417 aaPredicted RBP11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 ST13P4Q8IZP2 240 aaPredicted RBP11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 LRRC25Q8N386 305 aaPredicted RBP11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 NATD1Q8N6N6 113 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 DOK4Q8TEW6 326 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 TSPEARQ8WU66 669 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 FGF11Q92914 225 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 INPP5KQ9BT40 448 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 SLC25A23Q9BV35 468 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 FAM117AQ9C073 453 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 GPN2Q9H9Y4 310 aaPredicted RBP11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 SERHLQ9NQF3 203 aa11.37□□□□□ -0.59
TRAF3IP2-211ENST00000528599 ACSS1Q9NUB1 689 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms