RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 CTRB1P17538 263 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 COX10Q12887 443 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 DUOXA1Q1HG43 343 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 VMACQ2NL98 169 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 SAXO2Q658L1 398 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 CTRB2Q6GPI1 263 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 ERICH5Q6P6B1 374 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 ASB18Q6ZVZ8 466 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 KCTD20Q7Z5Y7 419 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 ZNF433Q8N7K0 673 aaPredicted RBP17.07■□□□□ 0.32
LTBP3-210ENST00000528516 TEX47Q8TBZ9 253 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 TRMT61AQ96FX7 289 aaKnown RBP17.07■□□□□ 0.32
LTBP3-210ENST00000528516 RPS6KB2Q9UBS0 482 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 KLHL21Q9UJP4 597 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 A0A075B6Q4 140 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 CLEC2LP0C7M8 214 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 APEX1P27695 318 aaKnown RBP17.07■□□□□ 0.32
LTBP3-210ENST00000528516 LASP1Q14847 261 aaKnown RBP17.07■□□□□ 0.32
LTBP3-210ENST00000528516 ZNF79Q15937 498 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 CRB2Q5IJ48 1285 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 SLC35F1Q5T1Q4 408 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 BHLHB9Q6PI77 547 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 TMC8Q8IU68 726 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 CPPED1Q9BRF8 314 aaPredicted RBP17.07■□□□□ 0.32
LTBP3-210ENST00000528516 SORBS1Q9BX66 1292 aaKnown RBP17.07■□□□□ 0.32
LTBP3-210ENST00000528516 RLFQ13129 1914 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 SHOXO15266 292 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 NUDT7P0C024 238 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 CSF2RAP15509 400 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 BMP7P18075 431 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 ZNF81P51508 661 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 TMEM115Q12893 351 aaPredicted RBP17.07■□□□□ 0.32
LTBP3-210ENST00000528516 B3GNT4Q9C0J1 378 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 MTIF3Q9H2K0 278 aaKnown RBP17.07■□□□□ 0.32
LTBP3-210ENST00000528516 POPDC3Q9HBV1 291 aa17.07■□□□□ 0.32
LTBP3-210ENST00000528516 PAK6Q9NQU5 681 aaPredicted RBP17.07■□□□□ 0.32
LTBP3-210ENST00000528516 LEFTY2O00292 366 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 FABP7O15540 132 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 PSPHP78330 225 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 RPL6Q02878 288 aaKnown RBP17.06■□□□□ 0.32
LTBP3-210ENST00000528516 ASAH1Q13510 395 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 UGT8Q16880 541 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 QRFPRQ96P65 431 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 TM9SF2Q99805 663 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 C1QTNF7Q9BXJ2 289 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 KCNH6Q9H252 994 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 TRAPPC4Q9Y296 219 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 RTTNQ86VV8 2226 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 B4GALT3O60512 393 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 CPN2P22792 545 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 SSTR2P30874 369 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 TCTE3Q8IZS6 198 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 OR9Q2Q8NGE9 314 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 SPACA7Q96KW9 195 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 ZNF860A6NHJ4 632 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 FKTNO75072 461 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 MSL3P1P0C860 447 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 ETV6P41212 452 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 CAV3P56539 151 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 PPIGQ13427 754 aaKnown RBP eCLIP17.06■□□□□ 0.321e-7■■□□□ 14.2
LTBP3-210ENST00000528516 TFGQ92734 400 aaPredicted RBP17.06■□□□□ 0.32
LTBP3-210ENST00000528516 UBE2E3Q969T4 207 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 TDP1Q9NUW8 608 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 GULP1Q9UBP9 304 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 V9GYH0 126 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 TANC1Q9C0D5 1861 aa17.06■□□□□ 0.32
LTBP3-210ENST00000528516 E7EQ34 232 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 RFPL3O75679 317 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 OR5F1O95221 314 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 RPL34P49207 117 aaKnown RBP17.05■□□□□ 0.32
LTBP3-210ENST00000528516 STX4Q12846 297 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 LARS2Q15031 903 aaKnown RBP17.05■□□□□ 0.32
LTBP3-210ENST00000528516 C17orf99Q6UX52 265 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 RSPO2Q6UXX9 243 aaPredicted RBP17.05■□□□□ 0.32
LTBP3-210ENST00000528516 ZNF551Q7Z340 670 aaPredicted RBP17.05■□□□□ 0.32
LTBP3-210ENST00000528516 NPAS3Q8IXF0 933 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 OR4M1Q8NGD0 313 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 ZFP3Q96NJ6 502 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 KCNK12Q9HB15 430 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 ARNT2Q9HBZ2 717 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 SPACA6W5XKT8 324 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 OR10H2O60403 315 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 ATF6P18850 670 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 ALAS2P22557 587 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 HOXD9P28356 352 aaPredicted RBP17.05■□□□□ 0.32
LTBP3-210ENST00000528516 SPHARQ15513 63 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 TRIM71Q2Q1W2 868 aaKnown RBP17.05■□□□□ 0.32
LTBP3-210ENST00000528516 MORN1Q5T089 497 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 LILRA3Q8N6C8 439 aaPredicted RBP17.05■□□□□ 0.32
LTBP3-210ENST00000528516 LINC01465Q8N7H1 131 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 GDPD1Q8N9F7 314 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 POP5Q969H6 163 aaKnown RBP17.05■□□□□ 0.32
LTBP3-210ENST00000528516 TADA1Q96BN2 335 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 BEX1Q9HBH7 125 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 SLC45A1Q9Y2W3 748 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 Q9Y3F1 56 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 TRAV6A0A075B6T7 132 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 FEZF1A0PJY2 475 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 MROH6A6NGR9 719 aa17.05■□□□□ 0.32
LTBP3-210ENST00000528516 FGBP02675 491 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms