RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 NOXRED1Q6NXP6 359 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 H3F3CQ6NXT2 135 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 OPN5Q6U736 354 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 Q6ZS92 163 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 R3HCC1LQ7Z5L2 792 aaKnown RBP5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 DND1Q8IYX4 353 aaKnown RBP5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 TAGAPQ8N103 731 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 SHISA5Q8N114 240 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 VWA5B2Q8N398 1253 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 RBMXL3Q8N7X1 1067 aaKnown RBP5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 FNDC5Q8NAU1 212 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 APCDD1LQ8NCL9 501 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 NFAM1Q8NET5 270 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 OR7G1Q8NGA0 311 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 OR8K3Q8NH51 312 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 CPT1CQ8TCG5 803 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 LRRC8CQ8TDW0 803 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 THAP3Q8WTV1 239 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 PTPMT1Q8WUK0 201 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 PSMF1Q92530 271 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 HAS2Q92819 552 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 EXOSC8Q96B26 276 aaKnown RBP5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 PPWD1Q96BP3 646 aaKnown RBP5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 PPCDCQ96CD2 204 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 TM4SF18Q96CE8 201 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 SENP5Q96HI0 755 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 GAL3ST4Q96RP7 486 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 PRPF18Q99633 342 aaKnown RBP5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 BRINP2Q9C0B6 783 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 EPN3Q9H201 632 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 MANSC1Q9H8J5 431 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 TIMMDC1Q9NPL8 285 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 SLC35C2Q9NQQ7 365 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 INTS9Q9NV88 658 aaKnown RBP5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 ATAD3AQ9NVI7 634 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 THAP1Q9NVV9 213 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 HPF1Q9NWY4 346 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 PLA2G3Q9NZ20 509 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 NOP53Q9NZM5 478 aaKnown RBP5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 LUZP4Q9P127 313 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 BCAP29Q9UHQ4 241 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 VPS4AQ9UN37 437 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 PPIEQ9UNP9 301 aaKnown RBP5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 MAPRE3Q9UPY8 281 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 ERVK-19Q9WJR5 959 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 EIF3LQ9Y262 564 aaKnown RBP5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 KLF13Q9Y2Y9 288 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 YARS2Q9Y2Z4 477 aaKnown RBP5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 PTGDR2Q9Y5Y4 395 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 FAM208BQ5VWN6 2430 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 MDC1Q14676 2089 aaKnown RBP5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 NUP210LQ5VU65 1888 aa5.03□□□□□ -1.6
HMGB1P40-201ENST00000525121 DMXL2Q8TDJ6 3036 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 WDFY3Q8IZQ1 3526 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 SPTBP11277 2137 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 ANKRD12Q6UB98 2062 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 UQCRHLA0A096LP55 91 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 ATP6AP2A0A1C7CYW4 349 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 NPIPB8E9PQR5 432 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 WWP2O00308 870 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 PDPK1O15530 556 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 PEX11AO75192 247 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 COQ9O75208 318 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 ITGA10O75578 1167 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 LYPLA1O75608 230 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 SLC25A12O75746 678 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 ATP6AP2O75787 350 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 OR2J2O76002 312 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 SORBS2O94875 1100 aaKnown RBP5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 RASAL1O95294 804 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 DDAH2O95865 285 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 F10P00742 488 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 CRYABP02511 175 aaKnown RBP5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 PRPS2P11908 318 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 PCSK2P16519 638 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 SDC1P18827 310 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 GPC1P35052 558 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 KRT20P35900 424 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 CD97P48960 835 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 TMED10P49755 219 aaKnown RBP5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 TNFSF10P50591 281 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 HLCSP50747 726 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 GPR143P51810 404 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 NCBP2P52298 156 aaKnown RBP eCLIP5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 PPP2R2AP63151 447 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 PSPHP78330 225 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 RPP38P78345 283 aaKnown RBP5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 RAE1P78406 368 aaKnown RBP5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 BST1Q10588 318 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 TUBA3CQ13748 450 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 MPP2Q14168 576 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 ZNHIT3Q15649 155 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 INPP5JQ15735 1006 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 MAPKAPK3Q16644 382 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 SMU1Q2TAY7 513 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 PLEKHN1Q494U1 663 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 XKR7Q5GH72 579 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 ZNF766Q5HY98 468 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 COLEC12Q5KU26 742 aa5.02□□□□□ -1.61
HMGB1P40-201ENST00000525121 TUBA3EQ6PEY2 450 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms