RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 SLC38A5Q8WUX1 472 aa9.42□□□□□ -0.9
SPARC-202ENST00000520687 GAB3Q8WWW8 586 aa9.42□□□□□ -0.9
SPARC-202ENST00000520687 FCGR1BQ92637 280 aa9.42□□□□□ -0.9
SPARC-202ENST00000520687 EXOSC8Q96B26 276 aaKnown RBP9.42□□□□□ -0.9
SPARC-202ENST00000520687 PPP1R14BQ96C90 147 aa9.42□□□□□ -0.9
SPARC-202ENST00000520687 BMFQ96LC9 184 aa9.42□□□□□ -0.9
SPARC-202ENST00000520687 FAM210AQ96ND0 272 aa9.42□□□□□ -0.9
SPARC-202ENST00000520687 TEFMQ96QE5 360 aaKnown RBP9.42□□□□□ -0.9
SPARC-202ENST00000520687 C17orf62Q9BQA9 187 aa9.42□□□□□ -0.9
SPARC-202ENST00000520687 SORBS1Q9BX66 1292 aaKnown RBP9.42□□□□□ -0.9
SPARC-202ENST00000520687 BTBD2Q9BX70 525 aa9.42□□□□□ -0.9
SPARC-202ENST00000520687 TRIM45Q9H8W5 580 aaPredicted RBP9.42□□□□□ -0.9
SPARC-202ENST00000520687 C3orf14Q9HBI5 128 aa9.42□□□□□ -0.9
SPARC-202ENST00000520687 POLMQ9NP87 494 aaPredicted RBP9.42□□□□□ -0.9
SPARC-202ENST00000520687 SIRT3Q9NTG7 399 aaPredicted RBP9.42□□□□□ -0.9
SPARC-202ENST00000520687 MS4A12Q9NXJ0 267 aa9.42□□□□□ -0.9
SPARC-202ENST00000520687 TBC1D29Q9UFV1 150 aa9.42□□□□□ -0.9
SPARC-202ENST00000520687 PHF11Q9UIL8 331 aa9.42□□□□□ -0.9
SPARC-202ENST00000520687 KCND3Q9UK17 655 aa9.42□□□□□ -0.9
SPARC-202ENST00000520687 ZMIZ1Q9ULJ6 1067 aa9.42□□□□□ -0.9
SPARC-202ENST00000520687 ENTPD4Q9Y227 616 aa9.42□□□□□ -0.9
SPARC-202ENST00000520687 LIPT1Q9Y234 373 aa9.42□□□□□ -0.9
SPARC-202ENST00000520687 KIR2DS5A0A0G2JLQ3 304 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 A0A0G2JNG1 304 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 A0A0G2JPF8 293 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 A6NCN8 305 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 POM121BA6NF01 834 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 HNRNPCL2B2RXH8 293 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 HNRNPCL3B7ZW38 293 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 KIR2DS3K7RE56 304 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 HAT1O14929 419 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 SLITRK5O94991 958 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 CCNB2O95067 398 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 ZIC2O95409 532 aaPredicted RBP9.41□□□□□ -0.9
SPARC-202ENST00000520687 TNFP01375 233 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 C1QCP02747 245 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 SERPIND1P05546 499 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 FHP07954 510 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 HNRNPCL4P0DMR1 293 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 GGT2P36268 569 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 RANBP1P43487 201 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 LIMS1P48059 325 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 CLK3P49761 638 aaKnown RBP9.41□□□□□ -0.9
SPARC-202ENST00000520687 PLA2G16P53816 162 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 RPP38P78345 283 aaKnown RBP9.41□□□□□ -0.9
SPARC-202ENST00000520687 SPIBQ01892 262 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 HYAL2Q12891 473 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 RAPSNQ13702 412 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 KIR2DS5Q14953 304 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 MAD2L1BPQ15013 274 aaPredicted RBP9.41□□□□□ -0.9
SPARC-202ENST00000520687 CEBPEQ15744 281 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 CTU2Q2VPK5 515 aaKnown RBP9.41□□□□□ -0.9
SPARC-202ENST00000520687 COLEC12Q5KU26 742 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 SLC48A1Q6P1K1 146 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 LINC00299Q6ZSB3 139 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 ZNF605Q86T29 641 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 FAM124AQ86V42 546 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 CROCCP3Q8IVE0 287 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 SLC44A3Q8N4M1 653 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 ZNF655Q8N720 491 aaPredicted RBP9.41□□□□□ -0.9
SPARC-202ENST00000520687 HORMAD2Q8N7B1 307 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 TMEM145Q8NBT3 493 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 OR5AK3PQ8NH89 298 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 RSC1A1Q92681 617 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 MUL1Q969V5 352 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 FKBP10Q96AY3 582 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 ERLEC1Q96DZ1 483 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 SLC35G5Q96KT7 338 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 GSDMCQ9BYG8 508 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 GPN2Q9H9Y4 310 aaPredicted RBP9.41□□□□□ -0.9
SPARC-202ENST00000520687 FANCEQ9HB96 536 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 SLAMF7Q9NQ25 335 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 USP36Q9P275 1121 aaKnown RBP9.41□□□□□ -0.9
SPARC-202ENST00000520687 ACSL6Q9UKU0 697 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 TMCC3Q9ULS5 477 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 LHX6Q9UPM6 363 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 PLEKHM1Q9Y4G2 1056 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 ZNF780BQ9Y6R6 833 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 PCM1Q15154 2024 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 TRPM6Q9BX84 2022 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 OR2A25A4D2G3 310 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 HMGN4O00479 90 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 CASC3O15234 703 aaKnown RBP9.41□□□□□ -0.9
SPARC-202ENST00000520687 EMC8O43402 210 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 PROM1O43490 865 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 MITFO75030 526 aaPredicted RBP9.41□□□□□ -0.9
SPARC-202ENST00000520687 SOX30O94993 753 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 MFN2O95140 757 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 GADD45GO95257 159 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 SEMA4FO95754 770 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 ASGR2P07307 311 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 SLC35G6P0C7Q6 338 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 NDUFV2P19404 249 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 PCSK6P29122 969 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 TLX1P31314 330 aaPredicted RBP9.41□□□□□ -0.9
SPARC-202ENST00000520687 ACTR1BP42025 376 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 KCNJ5P48544 419 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 DGKEP52429 567 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 CRISP3P54108 245 aa9.41□□□□□ -0.9
SPARC-202ENST00000520687 ACTR1AP61163 376 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms