RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 METTL21AQ8WXB1 218 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 SMPDL3BQ92485 455 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 TFGQ92734 400 aaPredicted RBP3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 C8orf44Q96CB5 159 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 RBM41Q96IZ5 413 aaKnown RBP3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 RMDN2Q96LZ7 410 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 TRIB3Q96RU7 358 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 ELAC2Q9BQ52 826 aaKnown RBP3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 C19orf43Q9BQ61 176 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 MESP1Q9BRJ9 268 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 TTYH2Q9BSA4 534 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 SNRNP25Q9BV90 132 aaKnown RBP3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 MS4A7Q9GZW8 240 aaPredicted RBP3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 NDST4Q9H3R1 872 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 PARVAQ9NVD7 372 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 C14orf105Q9NVL8 296 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 SMOXQ9NWM0 555 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 HACD3Q9P035 362 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 CTSFQ9UBX1 484 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 C19orf25Q9UFG5 118 aaPredicted RBP3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 PCDHGB3Q9Y5G1 929 aa3.4□□□□□ -1.87
PDLIM5-218ENST00000513341 GLYATL1P3A0A0U1RQE8 302 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 LOC102723971A0A1B0GUV8 181 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 TUBAL3A6NHL2 446 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 HSPB2A8KAH6 182 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 F8VZ95 297 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 BCKDKO14874 412 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 PHF1O43189 567 aaPredicted RBP3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 NME2P1O60361 137 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 TMCC2O75069 709 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 WDR1O75083 606 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 MT-CYBP00156 380 aaPredicted RBP3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 ANXA2P07355 339 aaKnown RBP3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 HEXBP07686 556 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 MMP2P08253 660 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 CHRM5P08912 532 aaPredicted RBP3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 PNMA6AP0CW24 399 aaPredicted RBP3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 PAX1P15863 534 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 PSMA2P25787 234 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 IL1R2P27930 398 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 MIPP30301 263 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 SLC26A3P40879 764 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 PIK3CBP42338 1070 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 CYB561P49447 251 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 RPS16P62249 146 aaKnown RBP3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 HSF1Q00613 529 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 OC90Q02509 493 aaPredicted RBP3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 NIPAL4Q0D2K0 466 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 GALNT2Q10471 571 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 HSPB2Q16082 182 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 EXT1Q16394 746 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 MAPKAPK3Q16644 382 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 DEFB110Q30KQ9 67 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 CMPK2Q5EBM0 449 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 WASHC2DQ5SRD0 308 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 RIPPLY2Q5TAB7 128 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 GARNL3Q5VVW2 1013 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 KLHL10Q6JEL2 608 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 MZT2AQ6P582 158 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 TMEM108Q6UXF1 575 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 B3GNT6Q6ZMB0 384 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 RGS9BPQ6ZS82 235 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 NEK10Q6ZWH5 1172 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 MON1BQ7L1V2 547 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 PCGF5Q86SE9 256 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 DTX2Q86UW9 622 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 RPS19BP1Q86WX3 136 aaKnown RBP3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 TBC1D21Q8IYX1 336 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 BEST3Q8N1M1 668 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 SLC5A8Q8N695 610 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 ZFP62Q8NB50 900 aaPredicted RBP3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 FAM71BQ8TC56 605 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 CREB3L4Q8TEY5 395 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 RNASE6Q93091 150 aaKnown RBP3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 FAM136AQ96C01 138 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 IQCDQ96DY2 449 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 RITA1Q96K30 269 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 MCEEQ96PE7 176 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 PCDHB18PQ96TA0 734 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 CYTH2Q99418 400 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 ACTRT3Q9BYD9 372 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 OR52A5Q9H2C5 316 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 VPS37BQ9H9H4 285 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 MMP25Q9NPA2 562 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 MKKSQ9NPJ1 570 aaPredicted RBP3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 KLHL1Q9NR64 748 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 SAMSN1Q9NSI8 373 aaKnown RBP3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 ETNK2Q9NVF9 386 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 ZNF629Q9UEG4 869 aaPredicted RBP3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 PCSK1NQ9UHG2 260 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 RWDD2AQ9UIY3 292 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 GNPTGQ9UJJ9 305 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 ZNF711Q9Y462 761 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 ATP6V1DQ9Y5K8 247 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 DNAJC13O75165 2243 aa3.39□□□□□ -1.87
PDLIM5-218ENST00000513341 MEGF8Q7Z7M0 2845 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 NOTCH1P46531 2555 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 LOC285095A0A1B0GVY8 99 aa3.38□□□□□ -1.87
PDLIM5-218ENST00000513341 AQP7P3A6NL99 342 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms