RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 ADAP1O75689 374 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 SNAP29O95721 258 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 PIGRP01833 764 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 LINC00271P0C7V0 271 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 FAM90A13PP0C7W8 464 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 FAM90A24PP0C7X0 464 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 CSF2RBP32927 897 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 CPOXP36551 454 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 SLC1A2P43004 574 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 BRCC3P46736 316 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 PTDSS1P48651 473 aaKnown RBP4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 GALK1P51570 392 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 CNN1P51911 297 aaKnown RBP4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 PRKAG1P54619 331 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 ARPP19P56211 112 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 FOLH1Q04609 750 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 RBPJQ06330 500 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 RING1Q06587 406 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 FGL1Q08830 312 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 TMEM132DQ14C87 1099 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 GSTA3Q16772 222 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 ATG9BQ674R7 924 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 PLAG1Q6DJT9 500 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 DENND1BQ6P3S1 775 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 RFWD3Q6PCD5 774 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 VITQ6UXI7 678 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 Q6ZNX1 250 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 PLEKHG7Q6ZR37 379 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 HFE2Q6ZVN8 426 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 ABHD12BQ7Z5M8 362 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 ABI3BPQ7Z7G0 1075 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 HIPK1Q86Z02 1210 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 CROCCP3Q8IVE0 287 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 DCUN1D3Q8IWE4 304 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 ZNF276Q8N554 614 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 FAM89BQ8N5H3 189 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 SIRT6Q8N6T7 355 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 OR5B17Q8NGF7 314 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 FAM110DQ8TAY7 271 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 SH3RF2Q8TEC5 729 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 RNF166Q96A37 237 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 REPS1Q96D71 796 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 BOD1Q96IK1 185 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 GUCD1Q96NT3 240 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 DUX5Q96PT3 197 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 TMEM175Q9BSA9 504 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 MED10Q9BTT4 135 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 POLDIP3Q9BY77 421 aaKnown RBP4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 STRADBQ9C0K7 418 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 WNT10AQ9GZT5 417 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 ZNF768Q9H5H4 540 aaKnown RBP4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 CHMP1AQ9HD42 196 aaPredicted RBP4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 RAB9BQ9NP90 201 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 LIN7CQ9NUP9 197 aaKnown RBP4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 ERVK13-1Q9NX77 482 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 RASD1Q9Y272 281 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 GRIP1Q9Y3R0 1128 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 NR2E1Q9Y466 385 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 TNFRSF18Q9Y5U5 241 aa4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 SF3B1O75533 1304 aaKnown RBP eCLIP4.77□□□□□ -1.65
TRAPPC11-208ENST00000511955 A0A087WV48 116 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 GMNCA6NCL1 334 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 HIDE1A8MVS5 230 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 PDXKO00764 312 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 WIPF1O43516 503 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 ATP2C2O75185 946 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 DFFBO76075 338 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 NID1P14543 1247 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 TPH1P17752 444 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 TPSB2P20231 275 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 HSPA9P38646 679 aaKnown RBP4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 CAPZBP47756 277 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 SLC6A9P48067 706 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 NDST2P52849 883 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 NKX2-5P52952 324 aaPredicted RBP4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 UCP3P55916 312 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 ATP6V0D1P61421 351 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 IL9RQ01113 521 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 MTAPQ13126 283 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 ITGA9Q13797 1035 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 TPSAB1Q15661 275 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 DLG2Q15700 870 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 TMEM44Q2T9K0 475 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 USP41Q3LFD5 358 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 LIN52Q52LA3 116 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 TTC23Q5W5X9 447 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 LRRC8BQ6P9F7 803 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 LIPIQ6XZB0 460 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 IDO2Q6ZQW0 420 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 SLC26A9Q7LBE3 791 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 SMIM15Q7Z3B0 74 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 FAM90A1Q86YD7 464 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 DNAAF1Q8NEP3 725 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 OR51L1Q8NGJ5 315 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 OR5D13Q8NGL4 314 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 SCARB1Q8WTV0 552 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 NAT14Q8WUY8 206 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 DNAJC9Q8WXX5 260 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 P2RX5Q93086 422 aa4.76□□□□□ -1.65
TRAPPC11-208ENST00000511955 IGSF21Q96ID5 467 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms