RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 OBP2BQ9NPH6 170 aa5.01□□□□□ -1.61
GYPB-212ENST00000511198 KRCC1Q9NPI7 259 aaPredicted RBP5.01□□□□□ -1.61
GYPB-212ENST00000511198 WASH6PQ9NQA3 447 aa5.01□□□□□ -1.61
GYPB-212ENST00000511198 LIN7CQ9NUP9 197 aaKnown RBP5.01□□□□□ -1.61
GYPB-212ENST00000511198 TXLNGQ9NUQ3 528 aa5.01□□□□□ -1.61
GYPB-212ENST00000511198 PANK4Q9NVE7 773 aa5.01□□□□□ -1.61
GYPB-212ENST00000511198 P4HTMQ9NXG6 502 aa5.01□□□□□ -1.61
GYPB-212ENST00000511198 CPSF2Q9P2I0 782 aaKnown RBP5.01□□□□□ -1.61
GYPB-212ENST00000511198 LARSQ9P2J5 1176 aaKnown RBP5.01□□□□□ -1.61
GYPB-212ENST00000511198 AMACRQ9UHK6 382 aa5.01□□□□□ -1.61
GYPB-212ENST00000511198 XPO7Q9UIA9 1087 aaKnown RBP5.01□□□□□ -1.61
GYPB-212ENST00000511198 MOSPD1Q9UJG1 213 aa5.01□□□□□ -1.61
GYPB-212ENST00000511198 PACSIN2Q9UNF0 486 aaPredicted RBP5.01□□□□□ -1.61
GYPB-212ENST00000511198 ARL2BPQ9Y2Y0 163 aa5.01□□□□□ -1.61
GYPB-212ENST00000511198 CCDC88CQ9P219 2028 aa5.01□□□□□ -1.61
GYPB-212ENST00000511198 A8MV72 311 aaPredicted RBP5□□□□□ -1.61
GYPB-212ENST00000511198 CALUO43852 315 aaPredicted RBP5□□□□□ -1.61
GYPB-212ENST00000511198 HNRNPCL1O60812 293 aaKnown RBP5□□□□□ -1.61
GYPB-212ENST00000511198 DNAJB6O75190 326 aa5□□□□□ -1.61
GYPB-212ENST00000511198 ALOX12BO75342 701 aa5□□□□□ -1.61
GYPB-212ENST00000511198 LCATP04180 440 aa5□□□□□ -1.61
GYPB-212ENST00000511198 PCCBP05166 539 aa5□□□□□ -1.61
GYPB-212ENST00000511198 RPSAP08865 295 aaKnown RBP5□□□□□ -1.61
GYPB-212ENST00000511198 UCHL3P15374 230 aa5□□□□□ -1.61
GYPB-212ENST00000511198 MSH2P43246 934 aa5□□□□□ -1.61
GYPB-212ENST00000511198 TNFSF10P50591 281 aa5□□□□□ -1.61
GYPB-212ENST00000511198 CCNHP51946 323 aaPredicted RBP5□□□□□ -1.61
GYPB-212ENST00000511198 KIAA1024LP59773 190 aa5□□□□□ -1.61
GYPB-212ENST00000511198 SELENOVP59797 346 aa5□□□□□ -1.61
GYPB-212ENST00000511198 MYL6P60660 151 aa5□□□□□ -1.61
GYPB-212ENST00000511198 TRADDQ15628 312 aa5□□□□□ -1.61
GYPB-212ENST00000511198 INAQ16352 499 aa5□□□□□ -1.61
GYPB-212ENST00000511198 EXOC3L4Q17RC7 722 aa5□□□□□ -1.61
GYPB-212ENST00000511198 SGSM1Q2NKQ1 1148 aa5□□□□□ -1.61
GYPB-212ENST00000511198 PARP6Q2NL67 630 aa5□□□□□ -1.61
GYPB-212ENST00000511198 MYLK3Q32MK0 819 aa5□□□□□ -1.61
GYPB-212ENST00000511198 INO80DQ53TQ3 878 aaPredicted RBP5□□□□□ -1.61
GYPB-212ENST00000511198 RAB41Q5JT25 222 aa5□□□□□ -1.61
GYPB-212ENST00000511198 PM20D1Q6GTS8 502 aa5□□□□□ -1.61
GYPB-212ENST00000511198 C11orf63Q6NUN7 778 aa5□□□□□ -1.61
GYPB-212ENST00000511198 FAM198BQ6UWH4 519 aa5□□□□□ -1.61
GYPB-212ENST00000511198 CERS6Q6ZMG9 384 aa5□□□□□ -1.61
GYPB-212ENST00000511198 TRMT10CQ7L0Y3 403 aaKnown RBP5□□□□□ -1.61
GYPB-212ENST00000511198 ASRGL1Q7L266 308 aa5□□□□□ -1.61
GYPB-212ENST00000511198 ZNF571Q7Z3V5 609 aaPredicted RBP5□□□□□ -1.61
GYPB-212ENST00000511198 SPATA21Q7Z572 469 aa5□□□□□ -1.61
GYPB-212ENST00000511198 TBC1D1Q86TI0 1168 aaPredicted RBP5□□□□□ -1.61
GYPB-212ENST00000511198 LGI2Q8N0V4 545 aa5□□□□□ -1.61
GYPB-212ENST00000511198 ARHGAP18Q8N392 663 aa5□□□□□ -1.61
GYPB-212ENST00000511198 RIBC1Q8N443 379 aaPredicted RBP5□□□□□ -1.61
GYPB-212ENST00000511198 LRRC17Q8N6Y2 441 aa5□□□□□ -1.61
GYPB-212ENST00000511198 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5□□□□□ -1.61
GYPB-212ENST00000511198 GABPB2Q8TAK5 448 aaPredicted RBP5□□□□□ -1.61
GYPB-212ENST00000511198 ZFAND2BQ8WV99 257 aa5□□□□□ -1.61
GYPB-212ENST00000511198 KLHL29Q96CT2 875 aa5□□□□□ -1.61
GYPB-212ENST00000511198 DNAJC19Q96DA6 116 aa5□□□□□ -1.61
GYPB-212ENST00000511198 TBC1D31Q96DN5 1066 aa5□□□□□ -1.61
GYPB-212ENST00000511198 SPDL1Q96EA4 605 aa5□□□□□ -1.61
GYPB-212ENST00000511198 PERPQ96FX8 193 aa5□□□□□ -1.61
GYPB-212ENST00000511198 ZNF570Q96NI8 536 aa5□□□□□ -1.61
GYPB-212ENST00000511198 SERPINB12Q96P63 405 aa5□□□□□ -1.61
GYPB-212ENST00000511198 TGM7Q96PF1 710 aa5□□□□□ -1.61
GYPB-212ENST00000511198 TMEM237Q96Q45 408 aa5□□□□□ -1.61
GYPB-212ENST00000511198 ELAC2Q9BQ52 826 aaKnown RBP5□□□□□ -1.61
GYPB-212ENST00000511198 MLPHQ9BV36 600 aaPredicted RBP5□□□□□ -1.61
GYPB-212ENST00000511198 AP1M1Q9BXS5 423 aa5□□□□□ -1.61
GYPB-212ENST00000511198 GSDMCQ9BYG8 508 aa5□□□□□ -1.61
GYPB-212ENST00000511198 ZNF696Q9H7X3 374 aa5□□□□□ -1.61
GYPB-212ENST00000511198 HIF1ANQ9NWT6 349 aa5□□□□□ -1.61
GYPB-212ENST00000511198 PCYOX1Q9UHG3 505 aa5□□□□□ -1.61
GYPB-212ENST00000511198 TRAF3IP3Q9Y228 551 aa5□□□□□ -1.61
GYPB-212ENST00000511198 CR1P17927 2039 aa5□□□□□ -1.61
GYPB-212ENST00000511198 PCM1Q15154 2024 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 TCRBV7S3A2A0A539 114 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 TYW5A2RUC4 315 aaKnown RBP4.99□□□□□ -1.61
GYPB-212ENST00000511198 LRRD1A4D1F6 860 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 I6L893 689 aaPredicted RBP4.99□□□□□ -1.61
GYPB-212ENST00000511198 PEX12O00623 359 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 RASGRF2O14827 1237 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 TOX3O15405 576 aaPredicted RBP4.99□□□□□ -1.61
GYPB-212ENST00000511198 TGFB1I1O43294 461 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 RIPK2O43353 540 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 RGS14O43566 566 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 LDB2O43679 373 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 SNAP91O60641 907 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 SCRG1O75711 98 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 SOX30O94993 753 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 VENTXO95231 258 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 TNNC2P02585 160 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 FGGP02679 453 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 ARSBP15848 533 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 ACADSP16219 412 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 NELFEP18615 380 aaKnown RBP4.99□□□□□ -1.61
GYPB-212ENST00000511198 PRPH2P23942 346 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 CTNNA2P26232 953 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 TNFSF8P32971 234 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 NR1H2P55055 460 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 SH3BGRP55822 239 aaPredicted RBP4.99□□□□□ -1.61
GYPB-212ENST00000511198 EGR4Q05215 589 aa4.99□□□□□ -1.61
GYPB-212ENST00000511198 ILF3Q12906 894 aaKnown RBP eCLIP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms