RNA–Protein interactions for RNA: ENST00000509962.5

SMAD5-206, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-206ENST00000509962 LIME1Q9H400 295 aa13.65□□□□□ -0.22
SMAD5-206ENST00000509962 ZNF703Q9H7S9 590 aaPredicted RBP13.65□□□□□ -0.22
SMAD5-206ENST00000509962 PROK2Q9HC23 129 aa13.65□□□□□ -0.22
SMAD5-206ENST00000509962 RASSF1Q9NS23 344 aa13.65□□□□□ -0.22
SMAD5-206ENST00000509962 ZNF358Q9NW07 568 aa13.65□□□□□ -0.22
SMAD5-206ENST00000509962 ST6GALNAC2Q9UJ37 374 aa13.65□□□□□ -0.22
SMAD5-206ENST00000509962 ERVK-19Q9WJR5 959 aa13.65□□□□□ -0.22
SMAD5-206ENST00000509962 CHCHD2Q9Y6H1 151 aaPredicted RBP13.65□□□□□ -0.22
SMAD5-206ENST00000509962 ARHGAP21Q5T5U3 1957 aa13.65□□□□□ -0.22
SMAD5-206ENST00000509962 PRRC2AP48634 2157 aaKnown RBP13.64□□□□□ -0.23
SMAD5-206ENST00000509962 C15orf38-AP3S2A0A0A6YYH1 394 aa13.64□□□□□ -0.23
SMAD5-206ENST00000509962 TCRBV9S1A1TA0A576 114 aa13.64□□□□□ -0.23
SMAD5-206ENST00000509962 CAPN14A8MX76 684 aa13.64□□□□□ -0.23
SMAD5-206ENST00000509962 TP53I11O14683 189 aa13.64□□□□□ -0.23
SMAD5-206ENST00000509962 EIF3HO15372 352 aaKnown RBP eCLIP13.64□□□□□ -0.23
SMAD5-206ENST00000509962 TRAPPC6AO75865 159 aa13.64□□□□□ -0.23
SMAD5-206ENST00000509962 EPPINO95925 133 aa13.64□□□□□ -0.23
SMAD5-206ENST00000509962 C1QAP02745 245 aa13.64□□□□□ -0.23
SMAD5-206ENST00000509962 BMP5P22003 454 aa13.64□□□□□ -0.23
SMAD5-206ENST00000509962 DNASE1P24855 282 aa13.64□□□□□ -0.23
SMAD5-206ENST00000509962 GDF1P27539 372 aa13.64□□□□□ -0.23
SMAD5-206ENST00000509962 ARFIP1P53367 373 aa13.64□□□□□ -0.23
SMAD5-206ENST00000509962 TNFRSF17Q02223 184 aa13.64□□□□□ -0.23
SMAD5-206ENST00000509962 SF3B4Q15427 424 aaKnown RBP eCLIP13.64□□□□□ -0.23
SMAD5-206ENST00000509962 ZKSCAN8Q15776 578 aaPredicted RBP13.64□□□□□ -0.23
SMAD5-206ENST00000509962 GRHL2Q6ISB3 625 aa13.64□□□□□ -0.23
SMAD5-206ENST00000509962 CYP20A1Q6UW02 462 aa13.64□□□□□ -0.23
SMAD5-206ENST00000509962 ZCCHC7Q8N3Z6 543 aaKnown RBP13.64□□□□□ -0.23
SMAD5-206ENST00000509962 RNF175Q8N4F7 328 aa13.64□□□□□ -0.23
SMAD5-206ENST00000509962 TEX9Q8N6V9 391 aa13.64□□□□□ -0.23
SMAD5-206ENST00000509962 DIO2Q92813 273 aa13.64□□□□□ -0.23
SMAD5-206ENST00000509962 RMND5BQ96G75 393 aaPredicted RBP13.64□□□□□ -0.23
SMAD5-206ENST00000509962 MTERF1Q99551 399 aaKnown RBP13.64□□□□□ -0.23
SMAD5-206ENST00000509962 WWTR1Q9GZV5 400 aa13.64□□□□□ -0.23
SMAD5-206ENST00000509962 SLC6A15Q9H2J7 730 aa13.64□□□□□ -0.23
SMAD5-206ENST00000509962 WDR41Q9HAD4 459 aa13.64□□□□□ -0.23
SMAD5-206ENST00000509962 CRIM1Q9NZV1 1036 aa13.64□□□□□ -0.23
SMAD5-206ENST00000509962 RNF14Q9UBS8 474 aa13.64□□□□□ -0.23
SMAD5-206ENST00000509962 PCDHGA11Q9Y5H2 935 aa13.64□□□□□ -0.23
SMAD5-206ENST00000509962 NCKAP5O14513 1909 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 C2orf92A0A1B0GVN3 265 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 ANKRD33BA6NCL7 494 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 FAM159BA6NKW6 160 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 OR6C76A6NM76 312 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 WASHC1A8K0Z3 465 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 UBXN8O00124 270 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 PLPP1O14494 284 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 KERAO60938 352 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 PRKRAO75569 313 aaKnown RBP13.63□□□□□ -0.23
SMAD5-206ENST00000509962 LRATO95237 230 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 IL2RAP01589 272 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 GSTA2P09210 222 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 LTA4HP09960 611 aaKnown RBP13.63□□□□□ -0.23
SMAD5-206ENST00000509962 KLK2P20151 261 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 CRABP2P29373 138 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 GMPRP36959 345 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 HNRNPH2P55795 449 aaKnown RBP13.63□□□□□ -0.23
SMAD5-206ENST00000509962 SLC37A1P57057 533 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 PHEXP78562 749 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 DUSP8Q13202 625 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 CEBPEQ15744 281 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 NTRK2Q16620 822 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 SPRED3Q2MJR0 410 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 TBCELQ5QJ74 424 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 LIPJQ5W064 366 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 HLA-DQA1Q5Y7H0 255 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 MAATS1Q7Z4T9 603 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 PPM1NQ8N819 430 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 TNIP2Q8NFZ5 429 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 FAM222BQ8WU58 562 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 REPS1Q96D71 796 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 POM121Q96HA1 1249 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 ATOH8Q96SQ7 321 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 NAPGQ99747 312 aaPredicted RBP13.63□□□□□ -0.23
SMAD5-206ENST00000509962 ERP44Q9BS26 406 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 DPH5Q9H2P9 285 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 DMRT3Q9NQL9 472 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 LYARQ9NX58 379 aaKnown RBP13.63□□□□□ -0.23
SMAD5-206ENST00000509962 WHRNQ9P202 907 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 ZNF629Q9UEG4 869 aaPredicted RBP13.63□□□□□ -0.23
SMAD5-206ENST00000509962 CNOT11Q9UKZ1 510 aaKnown RBP13.63□□□□□ -0.23
SMAD5-206ENST00000509962 ACOT9Q9Y305 439 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 FREM3P0C091 2139 aa13.63□□□□□ -0.23
SMAD5-206ENST00000509962 LRRC3CA6NJW4 275 aa13.62□□□□□ -0.23
SMAD5-206ENST00000509962 GLOD5A6NK44 160 aa13.62□□□□□ -0.23
SMAD5-206ENST00000509962 A6NNC1 897 aa13.62□□□□□ -0.23
SMAD5-206ENST00000509962 SYCE1LA8MT33 242 aa13.62□□□□□ -0.23
SMAD5-206ENST00000509962 TRIM3O75382 744 aaPredicted RBP13.62□□□□□ -0.23
SMAD5-206ENST00000509962 FAM155BO75949 473 aa13.62□□□□□ -0.23
SMAD5-206ENST00000509962 ACSL3O95573 720 aa13.62□□□□□ -0.23
SMAD5-206ENST00000509962 FAM58BPP0C7Q3 252 aa13.62□□□□□ -0.23
SMAD5-206ENST00000509962 SLC35E2BP0CK96 405 aa13.62□□□□□ -0.23
SMAD5-206ENST00000509962 SLC35E2P0CK97 266 aa13.62□□□□□ -0.23
SMAD5-206ENST00000509962 CEACAM8P31997 349 aaPredicted RBP13.62□□□□□ -0.23
SMAD5-206ENST00000509962 GALNSP34059 522 aa13.62□□□□□ -0.23
SMAD5-206ENST00000509962 ASCL1P50553 236 aa13.62□□□□□ -0.23
SMAD5-206ENST00000509962 DGKQP52824 942 aa13.62□□□□□ -0.23
SMAD5-206ENST00000509962 RPS13P62277 151 aaKnown RBP13.62□□□□□ -0.23
SMAD5-206ENST00000509962 MRPS25P82663 173 aaKnown RBP13.62□□□□□ -0.23
SMAD5-206ENST00000509962 DLG1Q12959 904 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms