RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 CLK4Q9HAZ1 481 aaKnown RBP6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 TMBIM4Q9HC24 238 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 MMP25Q9NPA2 562 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 MID1IP1Q9NPA3 183 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 SLAMF7Q9NQ25 335 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 ZNF446Q9NWS9 450 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 PSD3Q9NYI0 1048 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 PTGFRNQ9P2B2 879 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 SLC12A4Q9UP95 1085 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 DTX4Q9Y2E6 619 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 LRRK2Q5S007 2527 aa6.71□□□□□ -1.34
TOPBP1-207ENST00000509162 TRBV11-1A0A0K0K1C0 115 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 URADA6NGE7 173 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 NPIPB8E9PQR5 432 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 PIP5K1BO14986 540 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 SLC28A2O43868 658 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 ENO1P06733 434 aaKnown RBP6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 KLK1P06870 262 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 IL3P08700 152 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 FAM58BPP0C7Q3 252 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 BGNP21810 368 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 IL10P22301 178 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 CPN2P22792 545 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 JAK1P23458 1154 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 ARL1P40616 181 aaPredicted RBP6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 CASRP41180 1078 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 TSFMP43897 325 aaKnown RBP6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 RAP1GDS1P52306 607 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 RRADP55042 308 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 HSD17B7P56937 341 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 TLE1Q04724 770 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 IFFO1Q0D2I5 559 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 KLRB1Q12918 225 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 CSTF3Q12996 717 aaKnown RBP6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 IFT88Q13099 833 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 RCN2Q14257 317 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 IGFBP7Q16270 282 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 HIST2H2ACQ16777 129 aaPredicted RBP6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 BTBD16Q32M84 506 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 ARL13AQ5H913 290 aaPredicted RBP6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 HIST2H2AA3Q6FI13 130 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 MAVSQ7Z434 540 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 GPR180Q86V85 440 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 KBTBD2Q8IY47 623 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 ZNF595Q8IYB9 648 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 CELF2-AS1Q8N7Q2 184 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 MDS2Q8NDY4 140 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 MYRIPQ8NFW9 859 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 SUN3Q8TAQ9 357 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 PPP4R1Q8TF05 950 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 ZNF721Q8TF20 911 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 RGMAQ96B86 450 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 PPWD1Q96BP3 646 aaKnown RBP6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 TM4SF18Q96CE8 201 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 ANAPC16Q96DE5 110 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 CNRIP1Q96F85 164 aaPredicted RBP6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 PGM2Q96G03 612 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 ZNF681Q96N22 645 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 IP6K3Q96PC2 410 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 SERPINI1Q99574 410 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 SH3GL2Q99962 352 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 CCDC77Q9BR77 488 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 ADAM19Q9H013 955 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 CLEC4MQ9H2X3 399 aaPredicted RBP6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 ELOVL6Q9H5J4 265 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 ANKRA2Q9H9E1 313 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 COPS7BQ9H9Q2 264 aaPredicted RBP6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 BRF2Q9HAW0 419 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 SSU72Q9NP77 194 aaKnown RBP6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 ANKRD10Q9NXR5 420 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 NOP53Q9NZM5 478 aaKnown RBP6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 ZDHHC2Q9UIJ5 367 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 POLR3HQ9Y535 204 aaPredicted RBP6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 DNAJC15Q9Y5T4 150 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 PTPN13Q12923 2485 aa6.7□□□□□ -1.34
TOPBP1-207ENST00000509162 CNTRLQ7Z7A1 2325 aa6.69□□□□□ -1.34
TOPBP1-207ENST00000509162 TMEM120BA0PK00 339 aa6.69□□□□□ -1.34
TOPBP1-207ENST00000509162 PINLYPA6NC86 204 aa6.69□□□□□ -1.34
TOPBP1-207ENST00000509162 B4DXG7 233 aa6.69□□□□□ -1.34
TOPBP1-207ENST00000509162 J3QW42 95 aa6.69□□□□□ -1.34
TOPBP1-207ENST00000509162 PSMD12O00232 456 aaPredicted RBP6.69□□□□□ -1.34
TOPBP1-207ENST00000509162 ADAM10O14672 748 aa6.69□□□□□ -1.34
TOPBP1-207ENST00000509162 AZIN1O14977 448 aa6.69□□□□□ -1.34
TOPBP1-207ENST00000509162 RGS16O15492 202 aaPredicted RBP6.69□□□□□ -1.34
TOPBP1-207ENST00000509162 PCDH7O60245 1069 aa6.69□□□□□ -1.34
TOPBP1-207ENST00000509162 NPHS1O60500 1241 aa6.69□□□□□ -1.34
TOPBP1-207ENST00000509162 TRIM13O60858 407 aa6.69□□□□□ -1.34
TOPBP1-207ENST00000509162 CTNSO60931 367 aa6.69□□□□□ -1.34
TOPBP1-207ENST00000509162 NEURL1O76050 574 aa6.69□□□□□ -1.34
TOPBP1-207ENST00000509162 MLYCDO95822 493 aa6.69□□□□□ -1.34
TOPBP1-207ENST00000509162 CD63P08962 238 aa6.69□□□□□ -1.34
TOPBP1-207ENST00000509162 S1PR1P21453 382 aa6.69□□□□□ -1.34
TOPBP1-207ENST00000509162 NME2P22392 152 aa6.69□□□□□ -1.34
TOPBP1-207ENST00000509162 PRPH2P23942 346 aa6.69□□□□□ -1.34
TOPBP1-207ENST00000509162 PTX3P26022 381 aaPredicted RBP6.69□□□□□ -1.34
TOPBP1-207ENST00000509162 COL8A1P27658 744 aa6.69□□□□□ -1.34
TOPBP1-207ENST00000509162 TIA1P31483 386 aaKnown RBP eCLIP6.69□□□□□ -1.34
TOPBP1-207ENST00000509162 STT3AP46977 705 aa6.69□□□□□ -1.34
TOPBP1-207ENST00000509162 CCT5P48643 541 aa6.69□□□□□ -1.34
TOPBP1-207ENST00000509162 TNFSF10P50591 281 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms