RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 NAGAP17050 411 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 SDC1P18827 310 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 TMED10P49755 219 aaKnown RBP7.91□□□□□ -1.14
PDGFC-205ENST00000506880 XKP51811 444 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 STX1BP61266 288 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 RPL38P63173 70 aaKnown RBP7.91□□□□□ -1.14
PDGFC-205ENST00000506880 MRPS22P82650 360 aaKnown RBP7.91□□□□□ -1.14
PDGFC-205ENST00000506880 MAT1AQ00266 395 aaKnown RBP7.91□□□□□ -1.14
PDGFC-205ENST00000506880 ATP1A4Q13733 1029 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 MEP1AQ16819 746 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 RFTN2Q52LD8 501 aaPredicted RBP7.91□□□□□ -1.14
PDGFC-205ENST00000506880 TCHHL1Q5QJ38 904 aaPredicted RBP7.91□□□□□ -1.14
PDGFC-205ENST00000506880 B3GNTL1Q67FW5 361 aaPredicted RBP7.91□□□□□ -1.14
PDGFC-205ENST00000506880 ISLR2Q6UXK2 745 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 TMEM64Q6YI46 380 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 LAPTM4BQ86VI4 370 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 TMEM151BQ8IW70 566 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 GALNT12Q8IXK2 581 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 RIMKLAQ8IXN7 391 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 FAM47BQ8NA70 645 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 NFAM1Q8NET5 270 aaPredicted RBP7.91□□□□□ -1.14
PDGFC-205ENST00000506880 RIT1Q92963 219 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 PPCDCQ96CD2 204 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 NAF1Q96HR8 494 aaKnown RBP7.91□□□□□ -1.14
PDGFC-205ENST00000506880 ZNF681Q96N22 645 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 SECISBP2Q96T21 854 aaKnown RBP7.91□□□□□ -1.14
PDGFC-205ENST00000506880 ZBTB18Q99592 522 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 WDR77Q9BQA1 342 aaPredicted RBP7.91□□□□□ -1.14
PDGFC-205ENST00000506880 EPS8L2Q9H6S3 715 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 AKTIPQ9H8T0 292 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 CXorf21Q9HAI6 301 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 TNFRSF12AQ9NP84 129 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 TCF7L2Q9NQB0 619 aa7.91□□□□□ -1.14
PDGFC-205ENST00000506880 SDR39U1Q9NRG7 319 aaPredicted RBP7.91□□□□□ -1.14
PDGFC-205ENST00000506880 PIEZO2Q9H5I5 2752 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 SAP18O00422 153 aaKnown RBP7.9□□□□□ -1.14
PDGFC-205ENST00000506880 ZNF195O14628 629 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 UBDO15205 165 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 ATXN7O15265 892 aaPredicted RBP7.9□□□□□ -1.14
PDGFC-205ENST00000506880 FGF17O60258 216 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 PRAMEF2O60811 474 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 AGR2O95994 175 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 IFNA16P05015 189 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 GUSBP08236 651 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 IL3P08700 152 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 ITPKBP27987 946 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 SERPINB3P29508 390 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 TRHRP34981 398 aaPredicted RBP7.9□□□□□ -1.14
PDGFC-205ENST00000506880 SOX11P35716 441 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 ANXA11P50995 505 aaKnown RBP7.9□□□□□ -1.14
PDGFC-205ENST00000506880 GPR143P51810 404 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 PGDP52209 483 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 RPS18P62269 152 aaKnown RBP7.9□□□□□ -1.14
PDGFC-205ENST00000506880 RPP38P78345 283 aaKnown RBP7.9□□□□□ -1.14
PDGFC-205ENST00000506880 PRR5P85299 388 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 C2orf80Q0P641 193 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 MFAP5Q13361 173 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 RPS6KA2Q15349 733 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 PDCD2Q16342 344 aaPredicted RBP7.9□□□□□ -1.14
PDGFC-205ENST00000506880 TBR1Q16650 682 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 SYT16Q17RD7 645 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 VPS26BQ4G0F5 336 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 CPTPQ5TA50 214 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 IL23RQ5VWK5 629 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 CES4AQ5XG92 561 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 RPUSD3Q6P087 351 aaKnown RBP7.9□□□□□ -1.14
PDGFC-205ENST00000506880 TMEM81Q6P7N7 255 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 HSDL2Q6YN16 418 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 SLC29A4Q7RTT9 530 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 VWA5B2Q8N398 1253 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 METTL27Q8N6F8 245 aaPredicted RBP7.9□□□□□ -1.14
PDGFC-205ENST00000506880 TRIML2Q8N7C3 387 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 APCDD1LQ8NCL9 501 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 OR2T11Q8NH01 316 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 SFXN5Q8TD22 340 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 OR5P2Q8WZ92 322 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 HAS2Q92819 552 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 PMM1Q92871 262 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 KLHL29Q96CT2 875 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 HSPBAP1Q96EW2 488 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 CHMP6Q96FZ7 201 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 SGCZQ96LD1 299 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 BBS4Q96RK4 519 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 CSF3RQ99062 836 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 ARHGAP9Q9BRR9 750 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 SLC25A23Q9BV35 468 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 NUF2Q9BZD4 464 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 DPY30Q9C005 99 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 C3orf14Q9HBI5 128 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 NECTIN3Q9NQS3 549 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 AIG1Q9NVV5 245 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 TEX10Q9NXF1 929 aaPredicted RBP7.9□□□□□ -1.14
PDGFC-205ENST00000506880 THUMPD1Q9NXG2 353 aaKnown RBP7.9□□□□□ -1.14
PDGFC-205ENST00000506880 TAS2R9Q9NYW1 312 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 KLHL14Q9P2G3 628 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 ZNF639Q9UID6 485 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 YARS2Q9Y2Z4 477 aaKnown RBP7.9□□□□□ -1.14
PDGFC-205ENST00000506880 PCDHGB3Q9Y5G1 929 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 GMEB1Q9Y692 573 aa7.9□□□□□ -1.14
PDGFC-205ENST00000506880 ITPR1Q14643 2758 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms