RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 ZDHHC1Q8WTX9 485 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 COL26A1Q96A83 441 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 TM4SF19Q96DZ7 209 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 C10orf90Q96M02 699 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 ZNF681Q96N22 645 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 FAIM2Q9BWQ8 316 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 ING2Q9H160 280 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 OCEL1Q9H607 264 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 LIN28AQ9H9Z2 209 aaKnown RBP11.5□□□□□ -0.57
LIN54-206ENST00000506560 KCMF1Q9P0J7 381 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 ANGPT4Q9Y264 503 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 UNC13CQ8NB66 2214 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 FFAR1O14842 300 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 PCDH17O14917 1159 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 TNFSF14O43557 240 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 KDM1AO60341 852 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 POU2F1P14859 743 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 ST6GAL1P15907 406 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 NR1H2P55055 460 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 ISL1P61371 349 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 STXBP1P61764 594 aaKnown RBP11.5□□□□□ -0.57
LIN54-206ENST00000506560 TRA2BP62995 288 aaKnown RBP11.5□□□□□ -0.57
LIN54-206ENST00000506560 SPIBQ01892 262 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 EXOC3L2Q2M3D2 409 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 KCTD21Q4G0X4 260 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 PARGQ86W56 976 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 C8orf59Q8N0T1 100 aaPredicted RBP11.5□□□□□ -0.57
LIN54-206ENST00000506560 VANGL1Q8TAA9 524 aaPredicted RBP11.5□□□□□ -0.57
LIN54-206ENST00000506560 SLC35G5Q96KT7 338 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 ZNF300Q96RE9 604 aaPredicted RBP11.5□□□□□ -0.57
LIN54-206ENST00000506560 C3orf18Q9UK00 162 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 WBP11Q9Y2W2 641 aaKnown RBP11.5□□□□□ -0.57
LIN54-206ENST00000506560 THADAQ6YHU6 1953 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 SLC28A2O43868 658 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 XPNPEP2O43895 674 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 CD247P20963 164 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 BCKDHBP21953 392 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 NTSP30990 170 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 SOX18P35713 384 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 ALDH3B2P48448 385 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 SMN1Q16637 294 aaKnown RBP11.5□□□□□ -0.57
LIN54-206ENST00000506560 TSPYL5Q86VY4 417 aaPredicted RBP11.5□□□□□ -0.57
LIN54-206ENST00000506560 NLGN4XQ8N0W4 816 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 SLC5A8Q8N695 610 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 PIK3C3Q8NEB9 887 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 APOBEC4Q8WW27 367 aaKnown RBP11.5□□□□□ -0.57
LIN54-206ENST00000506560 GAL3ST3Q96A11 431 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 SLC22A18Q96BI1 424 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 ZG16BQ96DA0 208 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 FEVQ99581 238 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 NIPSNAP1Q9BPW8 284 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 TREX2Q9BQ50 279 aaPredicted RBP11.5□□□□□ -0.57
LIN54-206ENST00000506560 GABARAPL1Q9H0R8 117 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 IL21RQ9HBE5 538 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 POT1Q9NUX5 634 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 PAK1IP1Q9NWT1 392 aaPredicted RBP11.5□□□□□ -0.57
LIN54-206ENST00000506560 EHD3Q9NZN3 535 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 FBXL21Q9UKT6 434 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 DMTF1Q9Y222 760 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 CEPT1Q9Y6K0 416 aa11.5□□□□□ -0.57
LIN54-206ENST00000506560 EML5Q05BV3 1969 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 TNFRSF11BO00300 401 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 BCKDKO14874 412 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 MFN2O95140 757 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 CHRM4P08173 479 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 HTR1AP08908 422 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 SLC35G6P0C7Q6 338 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 SMIM10L1P0DMW3 83 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 PCSK6P29122 969 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 RPS6KA3P51812 740 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 TPD52P55327 224 aaPredicted RBP11.49□□□□□ -0.57
LIN54-206ENST00000506560 RGS1Q08116 209 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 NEDD8Q15843 81 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 FAM111BQ6SJ93 734 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 TBC1D19Q8N5T2 526 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 AVL9Q8NBF6 648 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 TBC1D20Q96BZ9 403 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 SMIM10Q96HG1 83 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 COL21A1Q96P44 957 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 ZFYVE21Q9BQ24 234 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 A4GALTQ9NPC4 353 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 RP1P56715 2156 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 C5orf58C9J3I9 102 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 TMX2-CTNND1H3BSU7 103 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 LDB3O75112 727 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 MED26O95402 600 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 DCNP07585 359 aaKnown RBP11.49□□□□□ -0.57
LIN54-206ENST00000506560 NR2F6P10588 404 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 MATN1P21941 496 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 EEF1B2P24534 225 aaKnown RBP11.49□□□□□ -0.57
LIN54-206ENST00000506560 FMO3P31513 532 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 VSX2P58304 361 aaPredicted RBP11.49□□□□□ -0.57
LIN54-206ENST00000506560 DMWDQ09019 674 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 PMS2P3Q13401 168 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 LSAMPQ13449 338 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 C6orf132Q5T0Z8 1188 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 ZNF691Q5VV52 312 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 TTC23Q5W5X9 447 aa11.49□□□□□ -0.57
LIN54-206ENST00000506560 ZNF555Q8NEP9 628 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms