RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 ZNF284Q2VY69 593 aa5.51□□□□□ -1.53
SOX2-OT-218ENST00000498731 ESRP1Q6NXG1 681 aaKnown RBP5.51□□□□□ -1.53
SOX2-OT-218ENST00000498731 FBXL22Q6P050 247 aa5.51□□□□□ -1.53
SOX2-OT-218ENST00000498731 ALKAL2Q6UX46 152 aa5.51□□□□□ -1.53
SOX2-OT-218ENST00000498731 B3GLCTQ6Y288 498 aa5.51□□□□□ -1.53
SOX2-OT-218ENST00000498731 RASSF6Q6ZTQ3 369 aa5.51□□□□□ -1.53
SOX2-OT-218ENST00000498731 KCNMB4Q86W47 210 aa5.51□□□□□ -1.53
SOX2-OT-218ENST00000498731 NXPE1Q8N323 547 aa5.51□□□□□ -1.53
SOX2-OT-218ENST00000498731 L3MBTL4Q8NA19 623 aa5.51□□□□□ -1.53
SOX2-OT-218ENST00000498731 SYT14Q8NB59 555 aa5.51□□□□□ -1.53
SOX2-OT-218ENST00000498731 MDGA1Q8NFP4 955 aa5.51□□□□□ -1.53
SOX2-OT-218ENST00000498731 COQ8AQ8NI60 647 aa5.51□□□□□ -1.53
SOX2-OT-218ENST00000498731 ZNF675Q8TD23 568 aa5.51□□□□□ -1.53
SOX2-OT-218ENST00000498731 IGSF8Q969P0 613 aa5.51□□□□□ -1.53
SOX2-OT-218ENST00000498731 ZNF558Q96NG5 402 aa5.51□□□□□ -1.53
SOX2-OT-218ENST00000498731 ERVK-6Q9BXR3 956 aa5.51□□□□□ -1.53
SOX2-OT-218ENST00000498731 TM6SF2Q9BZW4 377 aa5.51□□□□□ -1.53
SOX2-OT-218ENST00000498731 ZYG11BQ9C0D3 744 aa5.51□□□□□ -1.53
SOX2-OT-218ENST00000498731 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.51□□□□□ -1.53
SOX2-OT-218ENST00000498731 C5AR2Q9P296 337 aa5.51□□□□□ -1.53
SOX2-OT-218ENST00000498731 RAPGEFL1Q9UHV5 662 aa5.51□□□□□ -1.53
SOX2-OT-218ENST00000498731 PLCL2Q9UPR0 1127 aa5.51□□□□□ -1.53
SOX2-OT-218ENST00000498731 EXO1Q9UQ84 846 aaKnown RBP5.51□□□□□ -1.53
SOX2-OT-218ENST00000498731 TRAPPC4Q9Y296 219 aa5.51□□□□□ -1.53
SOX2-OT-218ENST00000498731 NDUFAF1Q9Y375 327 aa5.51□□□□□ -1.53
SOX2-OT-218ENST00000498731 A0A1W2PPE3 182 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 OR6C75A6NL08 312 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 GFRA2O00451 464 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 ANGPT2O15123 496 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 MMP20O60882 483 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 HLA-DQB2P05538 268 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 ALPIP09923 528 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 EDN3P14138 238 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 MAGEA6P43360 314 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 XKP51811 444 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 AFF3P51826 1226 aaKnown RBP5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 AP1S2P56377 157 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 FAM189BP81408 668 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 FLI1Q01543 452 aaPredicted RBP5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 TWF1Q12792 350 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 ELAVL2Q12926 359 aaKnown RBP5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 ASAH1Q13510 395 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 GRIN2CQ14957 1233 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 QPRTQ15274 297 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 SHHQ15465 462 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 SNAPC1Q16533 368 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 AKIRIN2Q53H80 203 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 BCL2L15Q5TBC7 163 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 FAM198BQ6UWH4 519 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 TMEM91Q6ZNR0 172 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 WDR53Q7Z5U6 358 aaPredicted RBP5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 CCDC117Q8IWD4 279 aaPredicted RBP5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 ARL14EPQ8N8R7 260 aaPredicted RBP5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 GDPD1Q8N9F7 314 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 ITFG1Q8TB96 612 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 NCLNQ969V3 563 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 SLC25A28Q96A46 364 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 SEMA3CQ99985 751 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 CCDC32Q9BV29 185 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 SLC19A3Q9BZV2 496 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 SMG9Q9H0W8 520 aaKnown RBP5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 GLRX2Q9NS18 164 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 TMEM184CQ9NVA4 438 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 SLC2A6Q9UGQ3 507 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 BAIAP2Q9UQB8 552 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 ZFP37Q9Y6Q3 630 aaPredicted RBP5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 SCN10AQ9Y5Y9 1956 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 SPTBN2O15020 2390 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 SDK1Q7Z5N4 2213 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 VPS13AQ96RL7 3174 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 LOC105369274A0A096LPK9 316 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 A8MT66 165 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 SLC22A3O75751 556 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 POP4O95707 220 aaKnown RBP5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 CPN2P22792 545 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 HLA-FP30511 346 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 GDI1P31150 447 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 RYKP34925 604 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 SLC11A2P49281 568 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 WNT3AP56704 352 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 SNRPEP62304 92 aaKnown RBP5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 SMAD3P84022 425 aaKnown RBP5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 DEFA5Q01523 94 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 RUNX1T1Q06455 604 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 MAB21L1Q13394 359 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 ADAM15Q13444 863 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 CSHL1Q14406 222 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 PAFAH1B3Q15102 231 aaKnown RBP5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 AP5B1Q2VPB7 878 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 RAB41Q5JT25 222 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 RNF219Q5W0B1 726 aaPredicted RBP5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 TXNDC8Q6A555 127 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 ZNF425Q6IV72 752 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 RGS7BPQ6MZT1 257 aaPredicted RBP5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 IL27RAQ6UWB1 636 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 TMIGD1Q6UXZ0 262 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 TMPRSS11AQ6ZMR5 421 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 TRMT11Q7Z4G4 463 aaKnown RBP5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 OR4N4Q8N0Y3 316 aa5.5□□□□□ -1.53
SOX2-OT-218ENST00000498731 OR7G3Q8NG95 312 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms