RNA–Protein interactions for RNA: ENST00000498519.5

SHANK2-217, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-217ENST00000498519 WDR41Q9HAD4 459 aa12.55□□□□□ -0.4
SHANK2-217ENST00000498519 SNX15Q9NRS6 342 aa12.55□□□□□ -0.4
SHANK2-217ENST00000498519 BEX4Q9NWD9 120 aaPredicted RBP12.55□□□□□ -0.4
SHANK2-217ENST00000498519 PTBP2Q9UKA9 531 aaKnown RBP12.55□□□□□ -0.4
SHANK2-217ENST00000498519 RNF112Q9ULX5 631 aa12.55□□□□□ -0.4
SHANK2-217ENST00000498519 CD8B2A6NJW9 211 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 ARHGEF9O43307 516 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 TRIM3O75382 744 aaPredicted RBP12.54□□□□□ -0.4
SHANK2-217ENST00000498519 ATE1O95260 518 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 HPNP05981 417 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 CCDC166P0CW27 439 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 PCNAP12004 261 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 STMN1P16949 149 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 CTSSP25774 331 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 IVDP26440 423 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 MASP1P48740 699 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 TRPC1P48995 793 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 EEF1A1P68104 462 aaKnown RBP12.54□□□□□ -0.4
SHANK2-217ENST00000498519 TNFRSF17Q02223 184 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 LTBQ06643 244 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 CRYZQ08257 329 aaKnown RBP12.54□□□□□ -0.4
SHANK2-217ENST00000498519 RCAN2Q14206 197 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 E2F2Q14209 437 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 RPS6KA2Q15349 733 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 NHSL2Q5HYW2 709 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 DEPDC1Q5TB30 811 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 EEF1A1P5Q5VTE0 462 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 SHEQ5VZ18 495 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 LYPD8Q6UX82 237 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 TAOK1Q7L7X3 1001 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 OR4N5Q8IXE1 308 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 LAS2Q8IYD9 372 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 ZCCHC7Q8N3Z6 543 aaKnown RBP12.54□□□□□ -0.4
SHANK2-217ENST00000498519 FBXO36Q8NEA4 188 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 TNIP2Q8NFZ5 429 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 STAG3L4Q8TBR4 150 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 ISL2Q96A47 359 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 PPWD1Q96BP3 646 aaKnown RBP12.54□□□□□ -0.4
SHANK2-217ENST00000498519 ZFP3Q96NJ6 502 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 WWTR1Q9GZV5 400 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 DDX47Q9H0S4 455 aaKnown RBP12.54□□□□□ -0.4
SHANK2-217ENST00000498519 CNOT11Q9UKZ1 510 aaKnown RBP12.54□□□□□ -0.4
SHANK2-217ENST00000498519 SNX12Q9UMY4 172 aa12.54□□□□□ -0.4
SHANK2-217ENST00000498519 PRRC2AP48634 2157 aaKnown RBP12.53□□□□□ -0.4
SHANK2-217ENST00000498519 C2orf92A0A1B0GVN3 265 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 EEF1E1-BLOC1S5C9J1V9 151 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 RTCAO00442 366 aaKnown RBP12.53□□□□□ -0.4
SHANK2-217ENST00000498519 EEF1E1O43324 174 aaKnown RBP12.53□□□□□ -0.4
SHANK2-217ENST00000498519 ERN1O75460 977 aaKnown RBP12.53□□□□□ -0.4
SHANK2-217ENST00000498519 GPR75O95800 540 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 TGFB1P01137 390 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 CD1DP15813 335 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 CD22P20273 847 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 PIK3CBP42338 1070 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 CDK9P50750 372 aaKnown RBP12.53□□□□□ -0.4
SHANK2-217ENST00000498519 HERVK_113P63132 956 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 ERVK-8P63133 956 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 DR1Q01658 176 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 PCDH1Q08174 1060 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 PDIA2Q13087 525 aaKnown RBP12.53□□□□□ -0.4
SHANK2-217ENST00000498519 ZNF267Q14586 743 aaPredicted RBP12.53□□□□□ -0.4
SHANK2-217ENST00000498519 EBPQ15125 230 aaKnown RBP12.53□□□□□ -0.4
SHANK2-217ENST00000498519 PCBP2Q15366 365 aaKnown RBP eCLIP12.53□□□□□ -0.44e-6■■■■□ 23.1
SHANK2-217ENST00000498519 VASNQ6EMK4 673 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 ADNP2Q6IQ32 1131 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 ANKMY2Q8IV38 441 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 NAXEQ8NCW5 288 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 OR7G3Q8NG95 312 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 NTNG2Q96CW9 530 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 REPS1Q96D71 796 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 DTNBP1Q96EV8 351 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 DACH2Q96NX9 599 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 ERVK-6Q9BXR3 956 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 ACBD3Q9H3P7 528 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 PROK2Q9HC23 129 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 LYARQ9NX58 379 aaKnown RBP12.53□□□□□ -0.4
SHANK2-217ENST00000498519 OPTCQ9UBM4 332 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 ERVK-19Q9WJR5 959 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 HCFC1P51610 2035 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 ACANP16112 2415 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 DNHD1Q96M86 4753 aa12.53□□□□□ -0.4
SHANK2-217ENST00000498519 MBD3L4A6NDZ8 208 aaPredicted RBP12.52□□□□□ -0.41
SHANK2-217ENST00000498519 MBD3L3A6NE82 208 aaPredicted RBP12.52□□□□□ -0.41
SHANK2-217ENST00000498519 MBD3L5A6NJ08 208 aaPredicted RBP12.52□□□□□ -0.41
SHANK2-217ENST00000498519 CLCA1A8K7I4 914 aa12.52□□□□□ -0.41
SHANK2-217ENST00000498519 K7EPI3 171 aa12.52□□□□□ -0.41
SHANK2-217ENST00000498519 CASKO14936 926 aa12.52□□□□□ -0.41
SHANK2-217ENST00000498519 PRAMEF4O60810 478 aa12.52□□□□□ -0.41
SHANK2-217ENST00000498519 SEC31AO94979 1220 aaKnown RBP12.52□□□□□ -0.41
SHANK2-217ENST00000498519 ACTL6AO96019 429 aa12.52□□□□□ -0.41
SHANK2-217ENST00000498519 INHBBP09529 407 aa12.52□□□□□ -0.41
SHANK2-217ENST00000498519 SLC35E2BP0CK96 405 aa12.52□□□□□ -0.41
SHANK2-217ENST00000498519 SLC35E2P0CK97 266 aa12.52□□□□□ -0.41
SHANK2-217ENST00000498519 EPB42P16452 691 aa12.52□□□□□ -0.41
SHANK2-217ENST00000498519 TCP1P17987 556 aaKnown RBP12.52□□□□□ -0.41
SHANK2-217ENST00000498519 KRT15P19012 456 aa12.52□□□□□ -0.41
SHANK2-217ENST00000498519 PTX3P26022 381 aaPredicted RBP12.52□□□□□ -0.41
SHANK2-217ENST00000498519 HOXC12P31275 282 aa12.52□□□□□ -0.41
SHANK2-217ENST00000498519 ZNF136P52737 540 aa12.52□□□□□ -0.41
SHANK2-217ENST00000498519 SLC37A1P57057 533 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms