RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 MAGEB3O15480 346 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 CRLF1O75462 422 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 PTBP3O95758 552 aaKnown RBP3.13□□□□□ -1.91
CLK1-214ENST00000496205 GAS8O95995 478 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 RNF224P0DH78 156 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 PRKAR1AP10644 381 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 ANPEPP15144 967 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 GLRA2P23416 452 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 PTPN4P29074 926 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 CASQ1P31415 396 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 PMP22Q01453 160 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 CHIT1Q13231 466 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 FAM189A2Q15884 450 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 BOLA3Q53S33 107 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 OR6B2Q6IFH4 312 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 MACC1Q6ZN28 852 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 Q71RC1 249 aaPredicted RBP3.13□□□□□ -1.91
CLK1-214ENST00000496205 ITIH5Q86UX2 942 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 CCDC197Q8NCU1 140 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 FAM71CQ8NEG0 241 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 OR4L1Q8NH43 312 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 ZNF519Q8TB69 540 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 ESAMQ96AP7 390 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 CNOT6LQ96LI5 555 aaKnown RBP3.13□□□□□ -1.91
CLK1-214ENST00000496205 GPR137Q96N19 417 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 SPAG8Q99932 426 aaPredicted RBP3.13□□□□□ -1.91
CLK1-214ENST00000496205 ERP44Q9BS26 406 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 DCTN5Q9BTE1 182 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 PAPOLGQ9BWT3 736 aaKnown RBP3.13□□□□□ -1.91
CLK1-214ENST00000496205 CCSER1Q9C0I3 900 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 HOXD1Q9GZZ0 328 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 WWP1Q9H0M0 922 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 LRRC40Q9H9A6 602 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 IL1RAPQ9NPH3 570 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 SPHK2Q9NRA0 654 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 PLEK2Q9NYT0 353 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 KLHL8Q9P2G9 620 aaPredicted RBP3.13□□□□□ -1.91
CLK1-214ENST00000496205 SNX6Q9UNH7 406 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 SMC3Q9UQE7 1217 aa3.13□□□□□ -1.91
CLK1-214ENST00000496205 NKX6-3A6NJ46 265 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 NUDT21O43809 227 aaKnown RBP3.12□□□□□ -1.91
CLK1-214ENST00000496205 KLHL41O60662 606 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 SCGB2A1O75556 95 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 CEACAM4O75871 244 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 MFN2O95140 757 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 NXPH4O95158 308 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 OR6A2O95222 327 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 TXNDC12O95881 172 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 RPLP0P05388 317 aaKnown RBP3.12□□□□□ -1.91
CLK1-214ENST00000496205 TOP1P11387 765 aaKnown RBP3.12□□□□□ -1.91
CLK1-214ENST00000496205 PSMA5P28066 241 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 HLA-FP30511 346 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 CCL11P51671 97 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 CCR4P51679 360 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 SPIBQ01892 262 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 GABPAQ06546 454 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 SNX1Q13596 522 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 IDI1Q13907 227 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 KARSQ15046 597 aaKnown RBP3.12□□□□□ -1.91
CLK1-214ENST00000496205 OR1C1Q15619 314 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 TPD52L1Q16890 204 aaPredicted RBP3.12□□□□□ -1.91
CLK1-214ENST00000496205 ZFP69Q49AA0 526 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 TAF1BQ53T94 588 aaPredicted RBP3.12□□□□□ -1.91
CLK1-214ENST00000496205 CFAP157Q5JU67 520 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 DCAF12Q5T6F0 453 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 SNRNP48Q6IEG0 339 aaKnown RBP3.12□□□□□ -1.91
CLK1-214ENST00000496205 CCBE1Q6UXH8 406 aaPredicted RBP3.12□□□□□ -1.91
CLK1-214ENST00000496205 VASH2Q86V25 355 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 AMZ2Q86W34 360 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 ZNF573Q86YE8 665 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 UNC5CLQ8IV45 518 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 AQP11Q8NBQ7 271 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 OR9Q2Q8NGE9 314 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 OR56B2PQ8NGI1 322 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 OR56B1Q8NGI3 324 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 OR52M1Q8NGK5 317 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 OR5M9Q8NGP3 310 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 OR2T6Q8NHC8 308 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 MRGPRDQ8TDS7 321 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 LIPHQ8WWY8 451 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 ZNF274Q96GC6 653 aaPredicted RBP3.12□□□□□ -1.91
CLK1-214ENST00000496205 TAAR6Q96RI8 345 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 S1PR3Q99500 378 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 PLIN2Q99541 437 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 PYGO2Q9BRQ0 406 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 FICDQ9BVA6 458 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 DGCR6LQ9BY27 220 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 PITPNM3Q9BZ71 974 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 COG4Q9H9E3 785 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 HOMER3Q9NSC5 361 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 C6orf203Q9P0P8 240 aaPredicted RBP3.12□□□□□ -1.91
CLK1-214ENST00000496205 ASIC3Q9UHC3 531 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 FAM153AQ9UHL3 310 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 ERVK-19Q9WJR5 959 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 MAB21L2Q9Y586 359 aa3.12□□□□□ -1.91
CLK1-214ENST00000496205 C15orf38-AP3S2A0A0A6YYH1 394 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 TRIM49BA6NDI0 452 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 SLCO1B7G3V0H7 640 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 H0YC42 278 aa3.11□□□□□ -1.91
CLK1-214ENST00000496205 K7EQD1 137 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms