RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 CRLF3Q8IUI8 442 aa10.37□□□□□ -0.75
APTX-230ENST00000494649 ST13P4Q8IZP2 240 aaPredicted RBP10.37□□□□□ -0.75
APTX-230ENST00000494649 KRTCAP2Q8N6L1 136 aa10.37□□□□□ -0.75
APTX-230ENST00000494649 RAB3IL1Q8TBN0 382 aa10.37□□□□□ -0.75
APTX-230ENST00000494649 PIWIL2Q8TC59 973 aaKnown RBP10.37□□□□□ -0.75
APTX-230ENST00000494649 CIDECQ96AQ7 238 aaPredicted RBP10.37□□□□□ -0.75
APTX-230ENST00000494649 NPAS2Q99743 824 aa10.37□□□□□ -0.75
APTX-230ENST00000494649 CDCP1Q9H5V8 836 aa10.37□□□□□ -0.75
APTX-230ENST00000494649 HAO1Q9UJM8 370 aa10.37□□□□□ -0.75
APTX-230ENST00000494649 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.37□□□□□ -0.75
APTX-230ENST00000494649 ZNF780BQ9Y6R6 833 aa10.37□□□□□ -0.75
APTX-230ENST00000494649 TLN1Q9Y490 2541 aaKnown RBP10.36□□□□□ -0.75
APTX-230ENST00000494649 CNTRLQ7Z7A1 2325 aa10.36□□□□□ -0.75
APTX-230ENST00000494649 BLACEA4D250 179 aa10.36□□□□□ -0.75
APTX-230ENST00000494649 TCP11X1B4DZS4 312 aa10.36□□□□□ -0.75
APTX-230ENST00000494649 C9JVG2 144 aa10.36□□□□□ -0.75
APTX-230ENST00000494649 KLF11O14901 512 aa10.36□□□□□ -0.75
APTX-230ENST00000494649 PCDH17O14917 1159 aa10.36□□□□□ -0.75
APTX-230ENST00000494649 HDAC3O15379 428 aa10.36□□□□□ -0.75
APTX-230ENST00000494649 DIAPH2O60879 1101 aa10.36□□□□□ -0.75
APTX-230ENST00000494649 DDAH2O95865 285 aa10.36□□□□□ -0.75
APTX-230ENST00000494649 ICAM2P13598 275 aa10.36□□□□□ -0.75
APTX-230ENST00000494649 PORP16435 677 aaPredicted RBP10.36□□□□□ -0.75
APTX-230ENST00000494649 DDCP20711 480 aa10.36□□□□□ -0.75
APTX-230ENST00000494649 TRA2BP62995 288 aaKnown RBP10.36□□□□□ -0.75
APTX-230ENST00000494649 IGLV3-21P80748 117 aaPredicted RBP10.36□□□□□ -0.75
APTX-230ENST00000494649 SRSF11Q05519 484 aaKnown RBP10.36□□□□□ -0.75
APTX-230ENST00000494649 EXOSC7Q15024 291 aaKnown RBP10.36□□□□□ -0.75
APTX-230ENST00000494649 ZNF385BQ569K4 471 aa10.36□□□□□ -0.75
APTX-230ENST00000494649 TCTN3Q6NUS6 607 aa10.36□□□□□ -0.75
APTX-230ENST00000494649 CATSPER1Q8NEC5 780 aa10.36□□□□□ -0.75
APTX-230ENST00000494649 OR9A2Q8NGT5 310 aa10.36□□□□□ -0.75
APTX-230ENST00000494649 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.36□□□□□ -0.758e-6■□□□□ 10.5
APTX-230ENST00000494649 ELP5Q8TE02 316 aa10.36□□□□□ -0.75
APTX-230ENST00000494649 CKAP2Q8WWK9 683 aa10.36□□□□□ -0.75
APTX-230ENST00000494649 KAT2AQ92830 837 aa10.36□□□□□ -0.75
APTX-230ENST00000494649 DAZLQ92904 295 aaKnown RBP10.36□□□□□ -0.75
APTX-230ENST00000494649 SENP5Q96HI0 755 aaPredicted RBP10.36□□□□□ -0.75
APTX-230ENST00000494649 MAGED4Q96JG8 741 aa10.36□□□□□ -0.75
APTX-230ENST00000494649 GAL3ST4Q96RP7 486 aa10.36□□□□□ -0.75
APTX-230ENST00000494649 MMP25Q9NPA2 562 aa10.36□□□□□ -0.75
APTX-230ENST00000494649 MYNNQ9NPC7 610 aa10.36□□□□□ -0.75
APTX-230ENST00000494649 SH3BP4Q9P0V3 963 aa10.36□□□□□ -0.75
APTX-230ENST00000494649 WWP2O00308 870 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 SDHDO14521 159 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 ALPPP05187 535 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 SLC35E2P0CK97 266 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 CLCN2P51788 898 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 GPR143P51810 404 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 TRMT12Q53H54 448 aaKnown RBP10.35□□□□□ -0.75
APTX-230ENST00000494649 TMEM198Q66K66 360 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 RNF165Q6ZSG1 346 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 GALNT12Q8IXK2 581 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 BEST3Q8N1M1 668 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 OR7A2PQ8NGA2 310 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 OR14A16Q8NHC5 309 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 M1APQ8TC57 530 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 ZNF721Q8TF20 911 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 MAGEB18Q96M61 343 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 OR52B2Q96RD2 323 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 SMAD5Q99717 465 aaKnown RBP10.35□□□□□ -0.75
APTX-230ENST00000494649 CCT7Q99832 543 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 DEFB126Q9BYW3 111 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 MEAF6Q9HAF1 191 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 MED4Q9NPJ6 270 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 SLAMF7Q9NQ25 335 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 SLC35C2Q9NQQ7 365 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 SIRT5Q9NXA8 310 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 STMN3Q9NZ72 180 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 ENTPD4Q9Y227 616 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 PCDHGA9Q9Y5G4 932 aaKnown RBP10.35□□□□□ -0.75
APTX-230ENST00000494649 EIF4E1BA6NMX2 242 aaKnown RBP10.35□□□□□ -0.75
APTX-230ENST00000494649 WDPCPO95876 746 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 ALDOCP09972 364 aaKnown RBP10.35□□□□□ -0.75
APTX-230ENST00000494649 DRD2P14416 443 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 NCBP2P52298 156 aaKnown RBP eCLIP10.35□□□□□ -0.75
APTX-230ENST00000494649 GYS2P54840 703 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 ARG2P78540 354 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 HSPB3Q12988 150 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 NNATQ16517 81 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 ZNF468Q5VIY5 522 aaPredicted RBP10.35□□□□□ -0.75
APTX-230ENST00000494649 ABHD17BQ5VST6 288 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 ISLR2Q6UXK2 745 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 LRRC25Q8N386 305 aaPredicted RBP10.35□□□□□ -0.75
APTX-230ENST00000494649 OR1N1Q8NGS0 311 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 VMP1Q96GC9 406 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 FCRL1Q96LA6 429 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 C7orf26Q96N11 449 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 ZNF681Q96N22 645 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 BBS4Q96RK4 519 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 EBF4Q9BQW3 602 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 ADNPQ9H2P0 1102 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 CXorf21Q9HAI6 301 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 COPS7AQ9UBW8 275 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 PSME2Q9UL46 239 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 EIF3LQ9Y262 564 aaKnown RBP10.35□□□□□ -0.75
APTX-230ENST00000494649 TMED5Q9Y3A6 229 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 USH1CQ9Y6N9 552 aa10.35□□□□□ -0.75
APTX-230ENST00000494649 SPTA1P02549 2419 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 GABRR3A8MPY1 467 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms