RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 ERVK-21P61565 698 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 PARM1Q6UWI2 310 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 SVOPQ8N4V2 548 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 OR4D11Q8NGI4 311 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 OR5D16Q8NGK9 328 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 OR6Q1Q8NGQ2 317 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 OR2A1Q8NGT9 310 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 VANGL1Q8TAA9 524 aaPredicted RBP12.19□□□□□ -0.46
PRAME-213ENST00000492657 DYNC2LI1Q8TCX1 351 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 FGF14Q92915 247 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 RGMAQ96B86 450 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 DPH7Q9BTV6 452 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 MKRN2Q9H000 416 aaKnown RBP12.19□□□□□ -0.46
PRAME-213ENST00000492657 TRPV4Q9HBA0 871 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 PSORS1C1Q9UIG5 152 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 A0A1W2PS29 197 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 EPOPA6NHQ4 379 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 IFNA14P01570 189 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 CEACAM5P06731 702 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 STSP08842 583 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 ITGA2P17301 1181 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 CXCR2P25025 360 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 TGFBR2P37173 567 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 COPZ1P61923 177 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 HEPACAMQ14CZ8 416 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 SYPL1Q16563 259 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 COLEC12Q5KU26 742 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 ZNF605Q86T29 641 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 PIAS4Q8N2W9 510 aaPredicted RBP12.19□□□□□ -0.46
PRAME-213ENST00000492657 MFSD4AQ8N468 514 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 DNAJC22Q8N4W6 341 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 CREB3L4Q8TEY5 395 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 PHF10Q8WUB8 498 aaKnown RBP12.19□□□□□ -0.46
PRAME-213ENST00000492657 ZHX1-C8orf76Q96EF9 292 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 POFUT2Q9Y2G5 429 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 HCN4Q9Y3Q4 1203 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 GPSM3Q9Y4H4 160 aa12.19□□□□□ -0.46
PRAME-213ENST00000492657 A0A1W2PQU0 124 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 HMGN4O00479 90 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 CCNB2O95067 398 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 IFNW1P05000 195 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 APODP05090 189 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 OR12D1P0DN82 309 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 CBLP22681 906 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 BCL6P41182 706 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 CCT3P49368 545 aaKnown RBP12.18□□□□□ -0.46
PRAME-213ENST00000492657 CLK1P49759 484 aaKnown RBP12.18□□□□□ -0.46
PRAME-213ENST00000492657 CRISP3P54108 245 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 PRDX1Q06830 199 aaKnown RBP12.18□□□□□ -0.46
PRAME-213ENST00000492657 USP43Q70EL4 1123 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 COMTD1Q86VU5 262 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 NUDT13Q86X67 352 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 OR14C36Q8NHC7 312 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 YIPF4Q9BSR8 244 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 NMNAT1Q9HAN9 279 aaPredicted RBP12.18□□□□□ -0.46
PRAME-213ENST00000492657 KCNK12Q9HB15 430 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 CCNB1IP1Q9NPC3 277 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 FBXL12Q9NXK8 326 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 SPHK1Q9NYA1 384 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 TAS2R16Q9NYV7 291 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 PDZK1P1A8MUH7 402 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 EFCAB9A8MZ26 197 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 M0R082 166 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 SLC31A1O15431 190 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 NME6O75414 186 aaPredicted RBP12.18□□□□□ -0.46
PRAME-213ENST00000492657 KCNK2O95069 426 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 MFN2O95140 757 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 ADRA2AP08913 450 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 GABRB1P18505 474 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 HSD17B2P37059 387 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 RACK1P63244 317 aaKnown RBP12.18□□□□□ -0.46
PRAME-213ENST00000492657 ELOAQ14241 798 aaKnown RBP12.18□□□□□ -0.46
PRAME-213ENST00000492657 KRT33BQ14525 404 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 PTGES3Q15185 160 aaKnown RBP12.18□□□□□ -0.46
PRAME-213ENST00000492657 SEC23BQ15437 767 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 SMUG1Q53HV7 270 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 SOWAHCQ53LP3 525 aaPredicted RBP12.18□□□□□ -0.46
PRAME-213ENST00000492657 AGAP7PQ5VUJ5 663 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 OR4C11Q6IEV9 310 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 KIAA1161Q6NSJ0 714 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 KLHL17Q6TDP4 642 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 LACC1Q8IV20 430 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 APOBEC4Q8WW27 367 aaKnown RBP12.18□□□□□ -0.46
PRAME-213ENST00000492657 XAGE5Q8WWM1 108 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 IPCEF1Q8WWN9 437 aaPredicted RBP12.18□□□□□ -0.46
PRAME-213ENST00000492657 PBX4Q9BYU1 374 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 PHPT1Q9NRX4 125 aaPredicted RBP12.18□□□□□ -0.46
PRAME-213ENST00000492657 ACSL5Q9ULC5 683 aa12.18□□□□□ -0.46
PRAME-213ENST00000492657 DNMT3AQ9Y6K1 912 aaPredicted RBP12.18□□□□□ -0.46
PRAME-213ENST00000492657 LRIT2A6NDA9 550 aa12.17□□□□□ -0.46
PRAME-213ENST00000492657 ANHXE9PGG2 379 aa12.17□□□□□ -0.46
PRAME-213ENST00000492657 PGRMC2O15173 223 aa12.17□□□□□ -0.46
PRAME-213ENST00000492657 RHCEP18577 417 aa12.17□□□□□ -0.46
PRAME-213ENST00000492657 SSR2P43308 183 aa12.17□□□□□ -0.46
PRAME-213ENST00000492657 HMGA2P52926 109 aa12.17□□□□□ -0.46
PRAME-213ENST00000492657 PRKAG1P54619 331 aa12.17□□□□□ -0.46
PRAME-213ENST00000492657 SGCGQ13326 291 aa12.17□□□□□ -0.46
PRAME-213ENST00000492657 UAP1L1Q3KQV9 507 aa12.17□□□□□ -0.46
PRAME-213ENST00000492657 SYCE2Q6PIF2 218 aa12.17□□□□□ -0.46
PRAME-213ENST00000492657 LSRQ86X29 649 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms