RNA–Protein interactions for RNA: ENST00000491519.4

SATB1-216, Transcript of SATB homeobox 1, humanhuman

TSL 2 BASIC

Gene SATB1, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-216ENST00000491519 NT5C2P49902 561 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 DNA2P51530 1060 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 HAND2P61296 217 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 SP3Q02447 781 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 ABRQ12979 859 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 TEAD2Q15562 447 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 SLC39A12Q504Y0 691 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 XKR6Q5GH73 641 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 FFAR4Q5NUL3 377 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 CENPPQ6IPU0 288 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 PODNL1Q6PEZ8 512 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 PRSS55Q6UWB4 352 aaPredicted RBP3.45□□□□□ -1.86
SATB1-216ENST00000491519 KCTD9Q7L273 389 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 RABEPKQ7Z6M1 372 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 PRUNE1Q86TP1 453 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 PRSS35Q8N3Z0 413 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 PDCL2Q8N4E4 241 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 MRPL43Q8N983 215 aaKnown RBP3.45□□□□□ -1.86
SATB1-216ENST00000491519 TMEM178AQ8NBL3 297 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 CNNM3Q8NE01 707 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 GPRC5AQ8NFJ5 357 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 TRIM58Q8NG06 486 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 OR4C15Q8NGM1 316 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 OR8K3Q8NH51 312 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 CCDC110Q8TBZ0 833 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 ACMSDQ8TDX5 336 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 PIK3R3Q92569 461 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 LRRC45Q96CN5 670 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 PDLIM5Q96HC4 596 aaKnown RBP3.45□□□□□ -1.86
SATB1-216ENST00000491519 C10orf90Q96M02 699 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 NKX3-1Q99801 234 aaPredicted RBP3.45□□□□□ -1.86
SATB1-216ENST00000491519 IDI2Q9BXS1 227 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 NACAP1Q9BZK3 213 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 NYXQ9GZU5 481 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 ZNF350Q9GZX5 532 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 GFRA4Q9GZZ7 299 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 TSPYL1Q9H0U9 437 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 HSD3B7Q9H2F3 369 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 UBQLN3Q9H347 655 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 SRD5A3Q9H8P0 318 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 SLCO1C1Q9NYB5 712 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 NINJ2Q9NZG7 142 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 CNIH4Q9P003 139 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 NARFQ9UHQ1 456 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 HBS1LQ9Y450 684 aaKnown RBP3.45□□□□□ -1.86
SATB1-216ENST00000491519 KLK4Q9Y5K2 254 aa3.45□□□□□ -1.86
SATB1-216ENST00000491519 V9GYY5 206 aaPredicted RBP3.45□□□□□ -1.86
SATB1-216ENST00000491519 COL2A1P02458 1487 aaPredicted RBP3.45□□□□□ -1.86
SATB1-216ENST00000491519 ATP8B3O60423 1300 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 LAMA2P24043 3122 aaKnown RBP3.44□□□□□ -1.86
SATB1-216ENST00000491519 ARFGEF2Q9Y6D5 1785 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 NPC1L1Q9UHC9 1359 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 IGHV4-4A0A075B6R2 117 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 A0A1W2PRV1 198 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 ZSCAN5CA6NGD5 496 aaPredicted RBP3.44□□□□□ -1.86
SATB1-216ENST00000491519 MSGN1A6NI15 193 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 HHLA1C9JL84 531 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 NME6O75414 186 aaPredicted RBP3.44□□□□□ -1.86
SATB1-216ENST00000491519 CDC123O75794 336 aaPredicted RBP3.44□□□□□ -1.86
SATB1-216ENST00000491519 AP2A2O94973 939 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 BAG3O95817 575 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 SLC16A8O95907 504 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 POLR2MP0CAP2 368 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 CFC1BP0CG36 223 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 CFC1P0CG37 223 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 TYMPP19971 482 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 CCNA2P20248 432 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 DUTP33316 252 aaKnown RBP3.44□□□□□ -1.86
SATB1-216ENST00000491519 S100A5P33763 92 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 CTNNB1P35222 781 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 LUMP51884 338 aaPredicted RBP3.44□□□□□ -1.86
SATB1-216ENST00000491519 EXT1Q16394 746 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 ZNF542PQ5EBM4 170 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 ZNF789Q5FWF6 425 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 C12orf60Q5U649 245 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 FAM53AQ6NSI3 398 aaPredicted RBP3.44□□□□□ -1.86
SATB1-216ENST00000491519 ZNF790Q6PG37 636 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 NHLRC1Q6VVB1 395 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 ZYG11AQ6WRX3 759 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 CPEB2Q7Z5Q1 589 aaKnown RBP3.44□□□□□ -1.86
SATB1-216ENST00000491519 CCDC60Q8IWA6 550 aaPredicted RBP3.44□□□□□ -1.86
SATB1-216ENST00000491519 CCDC83Q8IWF9 413 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 TRIML2Q8N7C3 387 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 RTL3Q8N8U3 475 aaKnown RBP3.44□□□□□ -1.86
SATB1-216ENST00000491519 AMER3Q8N944 861 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 LRTM2Q8N967 370 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 SLC37A3Q8NCC5 494 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 OR2T11Q8NH01 316 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 AGR3Q8TD06 166 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 CKAP2Q8WWK9 683 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 RAPGEF5Q92565 580 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 DYRK2Q92630 601 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 DCPSQ96C86 337 aaKnown RBP3.44□□□□□ -1.86
SATB1-216ENST00000491519 NXPE2Q96DL1 559 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 FBXO17Q96EF6 278 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 CDKN2AIPNLQ96HQ2 116 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 NECTIN4Q96NY8 510 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 PGLYRP2Q96PD5 576 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 TSSK2Q96PF2 358 aa3.44□□□□□ -1.86
SATB1-216ENST00000491519 F2RL3Q96RI0 385 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms