RNA–Protein interactions for RNA: ENST00000487841.5

SFT2D1-204, Transcript of SFT2 domain containing 1, humanhuman

TSL 1 (best)

Gene SFT2D1, Length 2,576 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D1-204ENST00000487841 KLHL25Q9H0H3 589 aa12.12□□□□□ -0.47
SFT2D1-204ENST00000487841 MVB12BQ9H7P6 319 aa12.12□□□□□ -0.47
SFT2D1-204ENST00000487841 PELI2Q9HAT8 420 aa12.12□□□□□ -0.47
SFT2D1-204ENST00000487841 SLC6A20Q9NP91 592 aa12.12□□□□□ -0.47
SFT2D1-204ENST00000487841 MRPS30Q9NP92 439 aaKnown RBP12.12□□□□□ -0.47
SFT2D1-204ENST00000487841 PHPT1Q9NRX4 125 aaPredicted RBP12.12□□□□□ -0.47
SFT2D1-204ENST00000487841 KCNE3Q9Y6H6 103 aa12.12□□□□□ -0.47
SFT2D1-204ENST00000487841 MDC1Q14676 2089 aaKnown RBP12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 ZSCAN9O15535 394 aaPredicted RBP12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 SEMA3DO95025 777 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 HNRNPCP07910 306 aaKnown RBP eCLIP12.11□□□□□ -0.474e-7■■□□□ 11.5
SFT2D1-204ENST00000487841 RHCEP18577 417 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 C5AR1P21730 350 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 CERS1P27544 350 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 ERVK-21P61565 698 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 HYAL2Q12891 473 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 TIGD6Q17RP2 521 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 TMEM196Q5HYL7 178 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 DCDC5Q6ZRR9 648 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 CENPSQ8N2Z9 138 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 STX19Q8N4C7 294 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 SVOPQ8N4V2 548 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 ZG16BQ96DA0 208 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 C16orf58Q96GQ5 468 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 AMDHD1Q96NU7 426 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 MTIF3Q9H2K0 278 aaKnown RBP12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 A0A1W2PR48 441 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 EFCAB9A8MZ26 197 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 H3BN98 237 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 NR2F1P10589 423 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 GABRB1P18505 474 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 PTNP21246 168 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 CBLP22681 906 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 GADD45AP24522 165 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 PEBP1P30086 187 aaKnown RBP12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 KIR2DL1P43626 348 aaPredicted RBP12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 CLK1P49759 484 aaKnown RBP12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 IFITM3Q01628 133 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 DLX2Q07687 328 aaPredicted RBP12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 TMEM107Q6UX40 140 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 ADCK1Q86TW2 530 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 FRMD1Q8N878 549 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 KCT2Q8NC54 265 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 SLC7A13Q8TCU3 470 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 TRUB1Q8WWH5 349 aaKnown RBP12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 OR5M11Q96RB7 305 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 ITPAQ9BY32 194 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 NEUROD4Q9HD90 331 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 CCNB1IP1Q9NPC3 277 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 SEMA3GQ9NS98 782 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 ACSL5Q9ULC5 683 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 TSC22D4Q9Y3Q8 395 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 VPS13AQ96RL7 3174 aa12.11□□□□□ -0.47
SFT2D1-204ENST00000487841 A0A0A6YYD5 115 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 SLC22A1O15245 554 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 FRS3O43559 492 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 COLEC12Q5KU26 742 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 TPRG1LQ5T0D9 272 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 FRMPD2BQ6IN97 320 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 KIAA1161Q6NSJ0 714 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 PTCHD4Q6ZW05 846 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 ACOT4Q8N9L9 421 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 SIMC1Q8NDZ2 872 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 DYNC2LI1Q8TCX1 351 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 ZNF675Q8TD23 568 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 ZHX1-C8orf76Q96EF9 292 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 CNRIP1Q96F85 164 aaPredicted RBP12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 BBS4Q96RK4 519 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 OR51E2Q9H255 320 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 C6orf106Q9H6K1 298 aaPredicted RBP12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 DDX31Q9H8H2 851 aaKnown RBP12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 SLC35C2Q9NQQ7 365 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 TBC1D29Q9UFV1 150 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 ISM1B1AKI9 464 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 CLDN25C9JDP6 229 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 BOLA2-SMG1P6H3BVE0 249 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 AIREO43918 545 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 RNGTTO60942 597 aaKnown RBP12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 HMGN2P05204 90 aaKnown RBP12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 CDK1P06493 297 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 OCM2P0CE71 109 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 OCMP0CE72 109 aaPredicted RBP12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 ADORA3P0DMS8 318 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 COL9A1P20849 921 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 ELAVL4P26378 380 aaKnown RBP12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 HMGA2P52926 109 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 RPS3AP61247 264 aaKnown RBP12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 RPS21P63220 83 aaKnown RBP12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 KCNC4Q03721 635 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 TARDBPQ13148 414 aaKnown RBP eCLIP12.1□□□□□ -0.479e-7■■■■□ 24
SFT2D1-204ENST00000487841 LRRC32Q14392 662 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 MED22Q15528 200 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 ITPRIPL2Q3MIP1 535 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 ZNF770Q6IQ21 691 aaPredicted RBP12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 IQCF1Q8N6M8 205 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 OR2L3Q8NG85 312 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 IPCEF1Q8WWN9 437 aaPredicted RBP12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 TSACCQ96A04 125 aaPredicted RBP12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 MS4A6EQ96DS6 147 aa12.1□□□□□ -0.47
SFT2D1-204ENST00000487841 TRPV4Q9HBA0 871 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms