RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 ZNF670-ZNF695F2Z2N8 137 aa23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 H3BN98 237 aa23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 NDUFS4O43181 175 aa23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 SLC28A2O43868 658 aa23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 B4GALT2O60909 372 aa23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 CSO75390 466 aaKnown RBP23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 UGT2B17O75795 530 aa23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 SPNP16150 400 aa23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 PPP2R1BP30154 601 aa23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 RORCP51449 518 aa23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 NTHL1P78549 312 aa23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 HSPB3Q12988 150 aa23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 DEF8Q6ZN54 512 aa23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 SLC34A3Q8N130 599 aa23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 RAB8BQ92930 207 aa23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 SDHCQ99643 169 aaPredicted RBP23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 LHX9Q9NQ69 397 aa23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 DNAJC27Q9NZQ0 273 aa23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 NUP210Q8TEM1 1887 aaPredicted RBP23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 RTCAO00442 366 aaKnown RBP23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 METRNLQ641Q3 311 aa23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 LRRTM4Q86VH4 590 aa23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 CXorf40AQ8TE69 158 aa23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 NXPE3Q969Y0 559 aa23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 RAB7BQ96AH8 199 aa23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 CTRCQ99895 268 aa23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 RSPO3Q9BXY4 272 aaPredicted RBP23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 BCL2L10Q9HD36 194 aa23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 DIMT1Q9UNQ2 313 aaKnown RBP23.32■■□□□ 1.32
SYNGAP1-206ENST00000479510 HYKKA2RU49 373 aa23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 DNTTP04053 509 aa23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 ITGB8P26012 769 aa23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 TNFSF8P32971 234 aa23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 CASP3P42574 277 aa23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 CRYBB2P43320 205 aa23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 MAGEA10P43363 369 aaPredicted RBP23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 ANXA11P50995 505 aaKnown RBP23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 LRIT3Q3SXY7 679 aa23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 BBS10Q8TAM1 723 aa23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 SLC7A13Q8TCU3 470 aa23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 SLC35B4Q969S0 331 aa23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 CNPPD1Q9BV87 410 aa23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 TSSK6Q9BXA6 273 aa23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 ABCG4Q9H172 646 aa23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 A4GNTQ9UNA3 340 aa23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 SLC9A8Q9Y2E8 581 aa23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 IRGMA1A4Y4 181 aa23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 CTDSP2O14595 271 aa23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 CEBPBP17676 345 aa23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 HOXD12P35452 270 aa23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 TARDBPQ13148 414 aaKnown RBP eCLIP23.31■■□□□ 1.321e-6■■■■□ 23.6
SYNGAP1-206ENST00000479510 GNA13Q14344 377 aa23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 TMC5Q6UXY8 1006 aa23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 C2orf73Q8N5S3 287 aaPredicted RBP23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 EXOSC8Q96B26 276 aaKnown RBP23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 SLC35G5Q96KT7 338 aa23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 MENTQ9BUN1 341 aa23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 CUEDC1Q9NWM3 386 aaPredicted RBP23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 HCN2Q9UL51 889 aa23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 SNX11Q9Y5W9 270 aa23.31■■□□□ 1.32
SYNGAP1-206ENST00000479510 IQCMA0A1B0GVH7 501 aa23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 PRRT4C9JH25 899 aa23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 TMPRSS11DO60235 418 aa23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 NME6O75414 186 aaPredicted RBP23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 CLEC3AO75596 197 aa23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 SOX14O95416 240 aa23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 TP53P04637 393 aaPredicted RBP23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 POU2F2P09086 479 aa23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 ACRP10323 421 aa23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 ACADMP11310 421 aa23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 TP53BP2Q13625 1128 aa23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 DOC2BQ14184 412 aa23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 TCEAL5Q5H9L2 206 aa23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 FAM180BQ6P0A1 224 aa23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 OR4D11Q8NGI4 311 aa23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 VANGL1Q8TAA9 524 aaPredicted RBP23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 SLC6A18Q96N87 628 aa23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 LRRC3BQ96PB8 259 aa23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 KCNS3Q9BQ31 491 aa23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 HDAC8Q9BY41 377 aa23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 SERHL2Q9H4I8 314 aa23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 EXOSC4Q9NPD3 245 aaKnown RBP23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 SSR3Q9UNL2 185 aa23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 TMEM98Q9Y2Y6 226 aa23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 GRIP1Q9Y3R0 1128 aa23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 INSL6Q9Y581 213 aa23.3■■□□□ 1.32
SYNGAP1-206ENST00000479510 RPS19P39019 145 aaKnown RBP23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 PCYT1AP49585 367 aa23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 TMEM64Q6YI46 380 aa23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 GRASPQ7Z6J2 395 aaPredicted RBP23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 CLIP4Q8N3C7 705 aa23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 RAB42Q8N4Z0 105 aa23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 TCEANCQ8N8B7 351 aa23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 IL17RDQ8NFM7 739 aa23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 TTLQ8NG68 377 aa23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 NR4A3Q92570 626 aa23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 CLEC2DQ9UHP7 191 aa23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 PTPRSQ13332 1948 aa23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 HEPACAM2A8MVW5 462 aa23.29■■□□□ 1.32
SYNGAP1-206ENST00000479510 MYL12BO14950 172 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms