RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 UBQLN3Q9H347 655 aa15.7■□□□□ 0.1
VIM-204ENST00000478746 GRPEL1Q9HAV7 217 aa15.7■□□□□ 0.1
VIM-204ENST00000478746 PRM3Q9NNZ6 103 aa15.7■□□□□ 0.1
VIM-204ENST00000478746 GPRC5BQ9NZH0 403 aa15.7■□□□□ 0.1
VIM-204ENST00000478746 CAPN14A8MX76 684 aa15.69■□□□□ 0.1
VIM-204ENST00000478746 SNX4O95219 450 aa15.69■□□□□ 0.1
VIM-204ENST00000478746 CYP4B1P13584 511 aa15.69■□□□□ 0.1
VIM-204ENST00000478746 ZNF37AP17032 561 aaPredicted RBP15.69■□□□□ 0.1
VIM-204ENST00000478746 FPR1P21462 350 aa15.69■□□□□ 0.1
VIM-204ENST00000478746 MASP1P48740 699 aa15.69■□□□□ 0.1
VIM-204ENST00000478746 FOXF2Q12947 444 aa15.69■□□□□ 0.1
VIM-204ENST00000478746 CBLBQ13191 982 aa15.69■□□□□ 0.1
VIM-204ENST00000478746 AP5B1Q2VPB7 878 aa15.69■□□□□ 0.1
VIM-204ENST00000478746 EIPR1Q53HC9 387 aa15.69■□□□□ 0.1
VIM-204ENST00000478746 FRA10AC1Q70Z53 315 aa15.69■□□□□ 0.1
VIM-204ENST00000478746 PPIL6Q8IXY8 311 aa15.69■□□□□ 0.1
VIM-204ENST00000478746 TAGAPQ8N103 731 aa15.69■□□□□ 0.1
VIM-204ENST00000478746 SPC24Q8NBT2 197 aa15.69■□□□□ 0.1
VIM-204ENST00000478746 BBOF1Q8ND07 529 aa15.69■□□□□ 0.1
VIM-204ENST00000478746 CERS2Q96G23 380 aa15.69■□□□□ 0.1
VIM-204ENST00000478746 SFXN3Q9BWM7 321 aa15.69■□□□□ 0.1
VIM-204ENST00000478746 WWTR1Q9GZV5 400 aa15.69■□□□□ 0.1
VIM-204ENST00000478746 EHD1Q9H4M9 534 aa15.69■□□□□ 0.1
VIM-204ENST00000478746 C6orf203Q9P0P8 240 aaPredicted RBP15.69■□□□□ 0.1
VIM-204ENST00000478746 CTNNAL1Q9UBT7 734 aa15.69■□□□□ 0.1
VIM-204ENST00000478746 MXRA5Q9NR99 2828 aa15.68■□□□□ 0.1
VIM-204ENST00000478746 NCF1BA6NI72 391 aaPredicted RBP15.68■□□□□ 0.1
VIM-204ENST00000478746 NCF1CA8MVU1 366 aaPredicted RBP15.68■□□□□ 0.1
VIM-204ENST00000478746 RTCAO00442 366 aaKnown RBP15.68■□□□□ 0.1
VIM-204ENST00000478746 NCF1P14598 390 aaPredicted RBP15.68■□□□□ 0.1
VIM-204ENST00000478746 HIST1H1TP22492 207 aaPredicted RBP15.68■□□□□ 0.1
VIM-204ENST00000478746 SLCO1A2P46721 670 aa15.68■□□□□ 0.1
VIM-204ENST00000478746 HERVK_113P63132 956 aa15.68■□□□□ 0.1
VIM-204ENST00000478746 ERVK-8P63133 956 aa15.68■□□□□ 0.1
VIM-204ENST00000478746 PLIN5Q00G26 463 aa15.68■□□□□ 0.1
VIM-204ENST00000478746 DOC2AQ14183 400 aa15.68■□□□□ 0.1
VIM-204ENST00000478746 ZNF267Q14586 743 aaPredicted RBP15.68■□□□□ 0.1
VIM-204ENST00000478746 TSNQ15631 228 aaKnown RBP15.68■□□□□ 0.1
VIM-204ENST00000478746 ACKR1Q16570 336 aa15.68■□□□□ 0.1
VIM-204ENST00000478746 WIPI1Q5MNZ9 446 aaPredicted RBP15.68■□□□□ 0.1
VIM-204ENST00000478746 DCST1Q5T197 706 aa15.68■□□□□ 0.1
VIM-204ENST00000478746 BICRALQ6AI39 1079 aa15.68■□□□□ 0.1
VIM-204ENST00000478746 TMEM64Q6YI46 380 aa15.68■□□□□ 0.1
VIM-204ENST00000478746 RNF111Q6ZNA4 994 aa15.68■□□□□ 0.1
VIM-204ENST00000478746 SLC44A1Q8WWI5 657 aa15.68■□□□□ 0.1
VIM-204ENST00000478746 TANKQ92844 425 aa15.68■□□□□ 0.1
VIM-204ENST00000478746 NTNG2Q96CW9 530 aa15.68■□□□□ 0.1
VIM-204ENST00000478746 PTCD3Q96EY7 689 aaKnown RBP15.68■□□□□ 0.1
VIM-204ENST00000478746 RILPQ96NA2 401 aa15.68■□□□□ 0.1
VIM-204ENST00000478746 ZFP3Q96NJ6 502 aa15.68■□□□□ 0.1
VIM-204ENST00000478746 KRT12Q99456 494 aa15.68■□□□□ 0.1
VIM-204ENST00000478746 CCL19Q99731 98 aa15.68■□□□□ 0.1
VIM-204ENST00000478746 TM9SF2Q99805 663 aa15.68■□□□□ 0.1
VIM-204ENST00000478746 NAT9Q9BTE0 207 aa15.68■□□□□ 0.1
VIM-204ENST00000478746 ERVK-6Q9BXR3 956 aa15.68■□□□□ 0.1
VIM-204ENST00000478746 ANGPTL4Q9BY76 406 aa15.68■□□□□ 0.1
VIM-204ENST00000478746 RPF2Q9H7B2 306 aaKnown RBP15.68■□□□□ 0.1
VIM-204ENST00000478746 DNAJC11Q9NVH1 559 aa15.68■□□□□ 0.1
VIM-204ENST00000478746 ERVK-19Q9WJR5 959 aa15.68■□□□□ 0.1
VIM-204ENST00000478746 C15orf41Q9Y2V0 281 aa15.68■□□□□ 0.1
VIM-204ENST00000478746 PRAMEF4O60810 478 aa15.67■□□□□ 0.1
VIM-204ENST00000478746 BANF1O75531 89 aa15.67■□□□□ 0.1
VIM-204ENST00000478746 RCBTB2O95199 551 aa15.67■□□□□ 0.1
VIM-204ENST00000478746 ALOX15P16050 662 aaPredicted RBP15.67■□□□□ 0.1
VIM-204ENST00000478746 NAGLUP54802 743 aa15.67■□□□□ 0.1
VIM-204ENST00000478746 DIO3P55073 304 aa15.67■□□□□ 0.1
VIM-204ENST00000478746 FBXW4P57775 412 aa15.67■□□□□ 0.1
VIM-204ENST00000478746 LAPTM5Q13571 262 aa15.67■□□□□ 0.1
VIM-204ENST00000478746 RPS6KA2Q15349 733 aa15.67■□□□□ 0.1
VIM-204ENST00000478746 HIST2H2ACQ16777 129 aaPredicted RBP15.67■□□□□ 0.1
VIM-204ENST00000478746 FNDC7Q5VTL7 733 aa15.67■□□□□ 0.1
VIM-204ENST00000478746 PRAMEF9Q5VWM5 478 aa15.67■□□□□ 0.1
VIM-204ENST00000478746 HIST2H2AA3Q6FI13 130 aa15.67■□□□□ 0.1
VIM-204ENST00000478746 ADAMTSL2Q86TH1 951 aa15.67■□□□□ 0.1
VIM-204ENST00000478746 SPPL2AQ8TCT8 520 aa15.67■□□□□ 0.1
VIM-204ENST00000478746 INTS12Q96CB8 462 aaKnown RBP15.67■□□□□ 0.1
VIM-204ENST00000478746 PHACTR1Q9C0D0 580 aa15.67■□□□□ 0.1
VIM-204ENST00000478746 PIGMQ9H3S5 423 aa15.67■□□□□ 0.1
VIM-204ENST00000478746 UBTD1Q9HAC8 227 aa15.67■□□□□ 0.1
VIM-204ENST00000478746 TESMINQ9Y4I5 508 aa15.67■□□□□ 0.1
VIM-204ENST00000478746 NPFFR2Q9Y5X5 522 aa15.67■□□□□ 0.1
VIM-204ENST00000478746 DSCAMO60469 2012 aa15.67■□□□□ 0.1
VIM-204ENST00000478746 MED12Q93074 2177 aa15.66■□□□□ 0.1
VIM-204ENST00000478746 OR6C76A6NM76 312 aa15.66■□□□□ 0.1
VIM-204ENST00000478746 A8MXE2 369 aa15.66■□□□□ 0.1
VIM-204ENST00000478746 CTIFO43310 598 aaKnown RBP15.66■□□□□ 0.1
VIM-204ENST00000478746 SH3BGRLO75368 114 aa15.66■□□□□ 0.1
VIM-204ENST00000478746 CRLF1O75462 422 aa15.66■□□□□ 0.1
VIM-204ENST00000478746 CNOT4O95628 575 aaKnown RBP15.66■□□□□ 0.1
VIM-204ENST00000478746 ACTL6AO96019 429 aa15.66■□□□□ 0.1
VIM-204ENST00000478746 TLX1P31314 330 aaPredicted RBP15.66■□□□□ 0.1
VIM-204ENST00000478746 SOX18P35713 384 aa15.66■□□□□ 0.1
VIM-204ENST00000478746 SLC37A1P57057 533 aa15.66■□□□□ 0.1
VIM-204ENST00000478746 SLAMF1Q13291 335 aa15.66■□□□□ 0.1
VIM-204ENST00000478746 EBPQ15125 230 aaKnown RBP15.66■□□□□ 0.1
VIM-204ENST00000478746 TMEM35AQ53FP2 167 aa15.66■□□□□ 0.1
VIM-204ENST00000478746 PAGE2BQ5JRK9 111 aa15.66■□□□□ 0.1
VIM-204ENST00000478746 CCDC137Q6PK04 289 aaKnown RBP15.66■□□□□ 0.1
VIM-204ENST00000478746 ST13P4Q8IZP2 240 aaPredicted RBP15.66■□□□□ 0.1
VIM-204ENST00000478746 SNX31Q8N9S9 440 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms