RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 PCDH17O14917 1159 aa15.15■□□□□ 0.02
VHL-203ENST00000477538 ATP1B1P05026 303 aa15.15■□□□□ 0.02
VHL-203ENST00000477538 SNRPB2P08579 225 aaKnown RBP15.15■□□□□ 0.02
VHL-203ENST00000477538 MPIP34949 423 aa15.15■□□□□ 0.02
VHL-203ENST00000477538 MANFP55145 182 aaKnown RBP15.15■□□□□ 0.02
VHL-203ENST00000477538 OR4D2P58180 307 aa15.15■□□□□ 0.02
VHL-203ENST00000477538 SSPNQ14714 243 aa15.15■□□□□ 0.02
VHL-203ENST00000477538 VPS26BQ4G0F5 336 aa15.15■□□□□ 0.02
VHL-203ENST00000477538 FAM91A1Q658Y4 838 aa15.15■□□□□ 0.02
VHL-203ENST00000477538 CPZQ66K79 652 aa15.15■□□□□ 0.02
VHL-203ENST00000477538 MSANTD1Q6ZTZ1 278 aa15.15■□□□□ 0.02
VHL-203ENST00000477538 ZNF551Q7Z340 670 aaPredicted RBP15.15■□□□□ 0.02
VHL-203ENST00000477538 ANKRD46Q86W74 232 aa15.15■□□□□ 0.02
VHL-203ENST00000477538 SNX32Q86XE0 403 aa15.15■□□□□ 0.02
VHL-203ENST00000477538 FITM2Q8N6M3 262 aa15.15■□□□□ 0.02
VHL-203ENST00000477538 VPS37AQ8NEZ2 397 aa15.15■□□□□ 0.02
VHL-203ENST00000477538 SUN3Q8TAQ9 357 aa15.15■□□□□ 0.02
VHL-203ENST00000477538 AMDHD1Q96NU7 426 aa15.15■□□□□ 0.02
VHL-203ENST00000477538 SLC25A23Q9BV35 468 aa15.15■□□□□ 0.02
VHL-203ENST00000477538 GLIPR2Q9H4G4 154 aa15.15■□□□□ 0.02
VHL-203ENST00000477538 ADAP2Q9NPF8 381 aa15.15■□□□□ 0.02
VHL-203ENST00000477538 SLC52A3Q9NQ40 469 aa15.15■□□□□ 0.02
VHL-203ENST00000477538 PNO1Q9NRX1 252 aaKnown RBP15.15■□□□□ 0.02
VHL-203ENST00000477538 C19orf25Q9UFG5 118 aaPredicted RBP15.15■□□□□ 0.02
VHL-203ENST00000477538 PRSS51A0A1B0GVH4 220 aa15.14■□□□□ 0.01
VHL-203ENST00000477538 A8MUA0 341 aa15.14■□□□□ 0.01
VHL-203ENST00000477538 CAPN14A8MX76 684 aa15.14■□□□□ 0.01
VHL-203ENST00000477538 SCN2BO60939 215 aa15.14■□□□□ 0.01
VHL-203ENST00000477538 CREG1O75629 220 aa15.14■□□□□ 0.01
VHL-203ENST00000477538 C6orf47O95873 294 aa15.14■□□□□ 0.01
VHL-203ENST00000477538 NT5EP21589 574 aa15.14■□□□□ 0.01
VHL-203ENST00000477538 MMP11P24347 488 aa15.14■□□□□ 0.01
VHL-203ENST00000477538 OTX2P32243 289 aa15.14■□□□□ 0.01
VHL-203ENST00000477538 PTGER1P34995 402 aa15.14■□□□□ 0.01
VHL-203ENST00000477538 HSPB3Q12988 150 aa15.14■□□□□ 0.01
VHL-203ENST00000477538 SRSF6Q13247 344 aaKnown RBP15.14■□□□□ 0.01
VHL-203ENST00000477538 IL10RAQ13651 578 aa15.14■□□□□ 0.01
VHL-203ENST00000477538 CYLC2Q14093 348 aaPredicted RBP15.14■□□□□ 0.01
VHL-203ENST00000477538 ELAVL1Q15717 326 aaKnown RBP15.14■□□□□ 0.01
VHL-203ENST00000477538 LTB4RQ15722 352 aa15.14■□□□□ 0.01
VHL-203ENST00000477538 SFT2D3Q587I9 215 aa15.14■□□□□ 0.01
VHL-203ENST00000477538 TRPM8Q7Z2W7 1104 aa15.14■□□□□ 0.01
VHL-203ENST00000477538 CPEB2Q7Z5Q1 589 aaKnown RBP15.14■□□□□ 0.01
VHL-203ENST00000477538 RAB43Q86YS6 212 aa15.14■□□□□ 0.01
VHL-203ENST00000477538 CLECL1Q8IZS7 167 aa15.14■□□□□ 0.01
VHL-203ENST00000477538 POU5F2Q8N7G0 328 aa15.14■□□□□ 0.01
VHL-203ENST00000477538 RP9Q8TA86 221 aaKnown RBP15.14■□□□□ 0.01
VHL-203ENST00000477538 PPWD1Q96BP3 646 aaKnown RBP15.14■□□□□ 0.01
VHL-203ENST00000477538 C8orf44Q96CB5 159 aa15.14■□□□□ 0.01
VHL-203ENST00000477538 RBM18Q96H35 190 aaKnown RBP15.14■□□□□ 0.01
VHL-203ENST00000477538 MESP1Q9BRJ9 268 aa15.14■□□□□ 0.01
VHL-203ENST00000477538 TMEM121BQ9BXQ6 578 aaPredicted RBP15.14■□□□□ 0.01
VHL-203ENST00000477538 RMND5AQ9H871 391 aa15.14■□□□□ 0.01
VHL-203ENST00000477538 BTNL2Q9UIR0 455 aa15.14■□□□□ 0.01
VHL-203ENST00000477538 HS3ST3B1Q9Y662 390 aa15.14■□□□□ 0.01
VHL-203ENST00000477538 EXPH5Q8NEV8 1989 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 LOC102723996A0A087X1L8 192 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 IGHV3-20A0A0C4DH32 117 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 LOC100653049A0A140TA62 436 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 A0A1W2PP18 115 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 ASPDHA6ND91 283 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 ANGPT2O15123 496 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 KRT34O76011 436 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 COX4I1P13073 169 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 TNNI3P19429 210 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 PRDX6P30041 224 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 GALNSP34059 522 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 GPC1P35052 558 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 EEF1A2Q05639 463 aaKnown RBP15.13■□□□□ 0.01
VHL-203ENST00000477538 LRRC74AQ0VAA2 488 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 MLC1Q15049 377 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 TLR1Q15399 786 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 MAPKAPK3Q16644 382 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 C6orf163Q5TEZ5 329 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 SLC2A7Q6PXP3 512 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 DGAT2L6Q6ZPD8 337 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 PPP1R32Q7Z5V6 425 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 ADCY4Q8NFM4 1077 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 OR4A15Q8NGL6 344 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 OR9A2Q8NGT5 310 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 OR5P2Q8WZ92 322 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 ITCHQ96J02 903 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 CCDC115Q96NT0 180 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 DPH1Q9BZG8 443 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 LEF1Q9UJU2 399 aaPredicted RBP15.13■□□□□ 0.01
VHL-203ENST00000477538 PCDHGB4Q9UN71 923 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 NDUFAF1Q9Y375 327 aa15.13■□□□□ 0.01
VHL-203ENST00000477538 BBIP1A8MTZ0 92 aa15.12■□□□□ 0.01
VHL-203ENST00000477538 C17orf105B2RV13 164 aa15.12■□□□□ 0.01
VHL-203ENST00000477538 SOCS6O14544 535 aa15.12■□□□□ 0.01
VHL-203ENST00000477538 KLK10O43240 276 aa15.12■□□□□ 0.01
VHL-203ENST00000477538 CPSF4O95639 269 aaKnown RBP15.12■□□□□ 0.01
VHL-203ENST00000477538 ABCB1P08183 1280 aaPredicted RBP15.12■□□□□ 0.01
VHL-203ENST00000477538 CDK9P50750 372 aaKnown RBP15.12■□□□□ 0.01
VHL-203ENST00000477538 HBA1P69905 142 aa15.12■□□□□ 0.01
VHL-203ENST00000477538 STX5Q13190 355 aa15.12■□□□□ 0.01
VHL-203ENST00000477538 TERF2Q15554 542 aa15.12■□□□□ 0.01
VHL-203ENST00000477538 PRICKLE4Q2TBC4 344 aa15.12■□□□□ 0.01
VHL-203ENST00000477538 MMEL1Q495T6 779 aa15.12■□□□□ 0.01
VHL-203ENST00000477538 ZNF628Q5EBL2 1059 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms