RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 CCR4P51679 360 aa4.8□□□□□ -1.64
SMC5-203ENST00000475540 ADARP55265 1226 aaKnown RBP4.8□□□□□ -1.64
SMC5-203ENST00000475540 KIAA1024LP59773 190 aa4.8□□□□□ -1.64
SMC5-203ENST00000475540 RPS6KA1Q15418 735 aa4.8□□□□□ -1.64
SMC5-203ENST00000475540 KBTBD12Q3ZCT8 623 aa4.8□□□□□ -1.64
SMC5-203ENST00000475540 LINC00242Q5T6M2 205 aa4.8□□□□□ -1.64
SMC5-203ENST00000475540 ETFRF1Q6IPR1 90 aa4.8□□□□□ -1.64
SMC5-203ENST00000475540 UNC5DQ6UXZ4 953 aa4.8□□□□□ -1.64
SMC5-203ENST00000475540 CYP4V2Q6ZWL3 525 aaPredicted RBP4.8□□□□□ -1.64
SMC5-203ENST00000475540 AQP12AQ8IXF9 295 aa4.8□□□□□ -1.64
SMC5-203ENST00000475540 CLYBLQ8N0X4 340 aa4.8□□□□□ -1.64
SMC5-203ENST00000475540 OR7G3Q8NG95 312 aa4.8□□□□□ -1.64
SMC5-203ENST00000475540 CNOT6LQ96LI5 555 aaKnown RBP4.8□□□□□ -1.64
SMC5-203ENST00000475540 ZNF559Q9BR84 538 aa4.8□□□□□ -1.64
SMC5-203ENST00000475540 ABCG8Q9H221 673 aa4.8□□□□□ -1.64
SMC5-203ENST00000475540 COMMD8Q9NX08 183 aa4.8□□□□□ -1.64
SMC5-203ENST00000475540 MIS18AQ9NYP9 233 aa4.8□□□□□ -1.64
SMC5-203ENST00000475540 APPL1Q9UKG1 709 aa4.8□□□□□ -1.64
SMC5-203ENST00000475540 ITM2BQ9Y287 266 aa4.8□□□□□ -1.64
SMC5-203ENST00000475540 RALGAPA1Q6GYQ0 2036 aa4.8□□□□□ -1.64
SMC5-203ENST00000475540 ACEP12821 1306 aa4.79□□□□□ -1.64
SMC5-203ENST00000475540 A0A087X0K7 114 aa4.79□□□□□ -1.64
SMC5-203ENST00000475540 SYCE3A1L190 88 aa4.79□□□□□ -1.64
SMC5-203ENST00000475540 CRCPO75575 148 aa4.79□□□□□ -1.64
SMC5-203ENST00000475540 BCAS2O75934 225 aaPredicted RBP4.79□□□□□ -1.64
SMC5-203ENST00000475540 KBTBD11O94819 623 aa4.79□□□□□ -1.64
SMC5-203ENST00000475540 GH1P01241 217 aa4.79□□□□□ -1.64
SMC5-203ENST00000475540 OR9G9P0C7N8 305 aa4.79□□□□□ -1.64
SMC5-203ENST00000475540 GPC3P51654 580 aa4.79□□□□□ -1.64
SMC5-203ENST00000475540 ST8SIA6P61647 398 aa4.79□□□□□ -1.64
SMC5-203ENST00000475540 GSTO1P78417 241 aa4.79□□□□□ -1.64
SMC5-203ENST00000475540 PCK2Q16822 640 aa4.79□□□□□ -1.64
SMC5-203ENST00000475540 LCE3EQ5T5B0 92 aa4.79□□□□□ -1.64
SMC5-203ENST00000475540 FHL5Q5TD97 284 aa4.79□□□□□ -1.64
SMC5-203ENST00000475540 CAPN13Q6MZZ7 669 aaPredicted RBP4.79□□□□□ -1.64
SMC5-203ENST00000475540 CCDC71Q8IV32 467 aaPredicted RBP4.79□□□□□ -1.64
SMC5-203ENST00000475540 CNTN4Q8IWV2 1026 aa4.79□□□□□ -1.64
SMC5-203ENST00000475540 KLHDC8AQ8IYD2 350 aa4.79□□□□□ -1.64
SMC5-203ENST00000475540 OR6T1Q8NGN1 323 aa4.79□□□□□ -1.64
SMC5-203ENST00000475540 SPATA18Q8TC71 538 aa4.79□□□□□ -1.64
SMC5-203ENST00000475540 PRAM1Q96QH2 718 aa4.79□□□□□ -1.64
SMC5-203ENST00000475540 KRT23Q9C075 422 aa4.79□□□□□ -1.64
SMC5-203ENST00000475540 ZNF350Q9GZX5 532 aa4.79□□□□□ -1.64
SMC5-203ENST00000475540 DHRS4-AS1Q9P1J3 65 aa4.79□□□□□ -1.64
SMC5-203ENST00000475540 ACTR3BQ9P1U1 418 aa4.79□□□□□ -1.64
SMC5-203ENST00000475540 TRPC4Q9UBN4 977 aa4.79□□□□□ -1.64
SMC5-203ENST00000475540 B4GALT7Q9UBV7 327 aa4.79□□□□□ -1.64
SMC5-203ENST00000475540 SLC6A5Q9Y345 797 aa4.79□□□□□ -1.64
SMC5-203ENST00000475540 FOXI3A8MTJ6 420 aaPredicted RBP4.78□□□□□ -1.64
SMC5-203ENST00000475540 KIAA0513O60268 411 aa4.78□□□□□ -1.64
SMC5-203ENST00000475540 SRPX2O60687 465 aaPredicted RBP4.78□□□□□ -1.64
SMC5-203ENST00000475540 CSO75390 466 aaKnown RBP4.78□□□□□ -1.64
SMC5-203ENST00000475540 UROSP10746 265 aa4.78□□□□□ -1.64
SMC5-203ENST00000475540 SPHARQ15513 63 aa4.78□□□□□ -1.64
SMC5-203ENST00000475540 ZNF789Q5FWF6 425 aa4.78□□□□□ -1.64
SMC5-203ENST00000475540 MARC1Q5VT66 337 aa4.78□□□□□ -1.64
SMC5-203ENST00000475540 RSBN1Q5VWQ0 802 aaPredicted RBP4.78□□□□□ -1.64
SMC5-203ENST00000475540 RFWD3Q6PCD5 774 aa4.78□□□□□ -1.64
SMC5-203ENST00000475540 KCTD9Q7L273 389 aa4.78□□□□□ -1.64
SMC5-203ENST00000475540 MIER3Q7Z3K6 550 aa4.78□□□□□ -1.64
SMC5-203ENST00000475540 CCDC197Q8NCU1 140 aa4.78□□□□□ -1.64
SMC5-203ENST00000475540 N4BP2L2Q92802 583 aaPredicted RBP4.78□□□□□ -1.64
SMC5-203ENST00000475540 ULK4Q96C45 1275 aa4.78□□□□□ -1.64
SMC5-203ENST00000475540 RBM18Q96H35 190 aaKnown RBP4.78□□□□□ -1.64
SMC5-203ENST00000475540 DNAJC17Q9NVM6 304 aaKnown RBP4.78□□□□□ -1.64
SMC5-203ENST00000475540 CYP39A1Q9NYL5 469 aa4.78□□□□□ -1.64
SMC5-203ENST00000475540 TAS2R3Q9NYW6 316 aa4.78□□□□□ -1.64
SMC5-203ENST00000475540 TBK1Q9UHD2 729 aa4.78□□□□□ -1.64
SMC5-203ENST00000475540 STX8Q9UNK0 236 aa4.78□□□□□ -1.64
SMC5-203ENST00000475540 PIN4Q9Y237 131 aaKnown RBP4.78□□□□□ -1.64
SMC5-203ENST00000475540 ATP6AP2A0A1C7CYW4 349 aa4.77□□□□□ -1.65
SMC5-203ENST00000475540 MPHOSPH10O00566 681 aaKnown RBP4.77□□□□□ -1.65
SMC5-203ENST00000475540 NOL3O60936 208 aaKnown RBP4.77□□□□□ -1.65
SMC5-203ENST00000475540 PDGFBP01127 241 aaPredicted RBP4.77□□□□□ -1.65
SMC5-203ENST00000475540 PIGRP01833 764 aa4.77□□□□□ -1.65
SMC5-203ENST00000475540 EZRP15311 586 aaKnown RBP4.77□□□□□ -1.65
SMC5-203ENST00000475540 CTNNB1P35222 781 aa4.77□□□□□ -1.65
SMC5-203ENST00000475540 MAGEB1P43366 347 aa4.77□□□□□ -1.65
SMC5-203ENST00000475540 NME5P56597 212 aa4.77□□□□□ -1.65
SMC5-203ENST00000475540 HTD2P86397 168 aa4.77□□□□□ -1.65
SMC5-203ENST00000475540 NAAAQ02083 359 aa4.77□□□□□ -1.65
SMC5-203ENST00000475540 CRMP1Q14194 572 aa4.77□□□□□ -1.65
SMC5-203ENST00000475540 SLC17A1Q14916 467 aa4.77□□□□□ -1.65
SMC5-203ENST00000475540 INAQ16352 499 aa4.77□□□□□ -1.65
SMC5-203ENST00000475540 CCBE1Q6UXH8 406 aaPredicted RBP4.77□□□□□ -1.65
SMC5-203ENST00000475540 THEM5Q8N1Q8 247 aa4.77□□□□□ -1.65
SMC5-203ENST00000475540 MRPL43Q8N983 215 aaKnown RBP4.77□□□□□ -1.65
SMC5-203ENST00000475540 ZBTB44Q8NCP5 570 aa4.77□□□□□ -1.65
SMC5-203ENST00000475540 LPCAT1Q8NF37 534 aa4.77□□□□□ -1.65
SMC5-203ENST00000475540 MRAPQ8TCY5 172 aa4.77□□□□□ -1.65
SMC5-203ENST00000475540 PRCCQ92733 491 aaPredicted RBP4.77□□□□□ -1.65
SMC5-203ENST00000475540 SNRNP40Q96DI7 357 aaKnown RBP4.77□□□□□ -1.65
SMC5-203ENST00000475540 EEF2KMTQ96G04 330 aa4.77□□□□□ -1.65
SMC5-203ENST00000475540 RUFY1Q96T51 708 aa4.77□□□□□ -1.65
SMC5-203ENST00000475540 CACNG6Q9BXT2 260 aa4.77□□□□□ -1.65
SMC5-203ENST00000475540 SLITRK2Q9H156 845 aa4.77□□□□□ -1.65
SMC5-203ENST00000475540 LIN28AQ9H9Z2 209 aaKnown RBP4.77□□□□□ -1.65
SMC5-203ENST00000475540 FAM212BQ9NTI7 297 aaPredicted RBP4.77□□□□□ -1.65
SMC5-203ENST00000475540 FETUBQ9UGM5 382 aa4.77□□□□□ -1.65
SMC5-203ENST00000475540 ERVK-19Q9WJR5 959 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms