RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 GLB1L2Q8IW92 636 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 FAM185AQ8N0U4 392 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 GCNT2Q8N0V5 402 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 ZNF276Q8N554 614 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 FAM46DQ8NEK8 389 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 NUDT10Q8NFP7 164 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 OR9A2Q8NGT5 310 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 LIPHQ8WWY8 451 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 OR1E3Q8WZA6 343 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 RSC1A1Q92681 617 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 WBP1Q96G27 269 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 BOD1Q96IK1 185 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 HIST1H2AHQ96KK5 128 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 COL21A1Q96P44 957 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 SLITRK1Q96PX8 696 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 MAP3K3Q99759 626 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 HIST1H2AJQ99878 128 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 P2RY13Q9BPV8 354 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 ZNF2Q9BSG1 426 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 ZNF577Q9BSK1 485 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 KATNB1Q9BVA0 655 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 PARD6GQ9BYG4 376 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 NKX6-2Q9C056 277 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 NXF2Q9GZY0 626 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 MAGEH1Q9H213 219 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 PPIL3Q9H2H8 161 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 REEP4Q9H6H4 257 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 BRF2Q9HAW0 419 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 DYRK4Q9NR20 520 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 ECHDC1Q9NTX5 307 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 PRMT7Q9NVM4 692 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 PNPOQ9NVS9 261 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 NINJ2Q9NZG7 142 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 IFT80Q9P2H3 777 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 RBPJLQ9UBG7 517 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 NUFIP1Q9UHK0 495 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 OSGIN1Q9UJX0 560 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 GJD2Q9UKL4 321 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 AAR2Q9Y312 384 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 C10orf71Q711Q0 1435 aa5.7□□□□□ -1.5
ECHDC1-215ENST00000475319 COL3A1P02461 1466 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 PAPPAQ13219 1627 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 ATP6AP2A0A1C7CYW4 349 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 ZC3H12DA2A288 527 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 C5orf51A6NDU8 294 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 KCNU1A8MYU2 1149 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 TRIM49D1C9J1S8 452 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 MCIDASD6RGH6 385 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 I6L893 689 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 MID1O15344 667 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 NRP2O60462 931 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 HCN1O60741 890 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 F10P00742 488 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 HMGCRP04035 888 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 IFNA6P05013 189 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 MMP10P09238 476 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 IQCF3P0C7M6 154 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 ATXN1LP0C7T5 689 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 STAG3L1P0CL83 205 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 NT5EP21589 574 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 ME2P23368 584 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 RPS3P23396 243 aaKnown RBP eCLIP5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 MYL9P24844 172 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 ITGA3P26006 1051 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 DDTP30046 118 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 AHRP35869 848 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 BRCC3P46736 316 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 SLC6A9P48067 706 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 LHX1P48742 406 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 GMFBP60983 142 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 SLC7A9P82251 487 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 CDC42EP1Q00587 391 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 MEF2AQ02078 507 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 CHIT1Q13231 466 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 SLAMF1Q13291 335 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 EXOSC2Q13868 293 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 ZNF239Q16600 458 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 FAM83EQ2M2I3 478 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 SPANXN2Q5MJ10 180 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 CLEC6AQ6EIG7 209 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 ABLIM2Q6H8Q1 611 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 ETFRF1Q6IPR1 90 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 FAM183BPQ6ZVS7 135 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 BHLHA15Q7RTS1 189 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 TAF8Q7Z7C8 310 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 TMEM200AQ86VY9 491 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 FAM129CQ86XR2 697 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 CRLF3Q8IUI8 442 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 GHDCQ8N2G8 530 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 STK40Q8N2I9 435 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 TMEM132CQ8N3T6 1108 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 PARP16Q8N5Y8 322 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 AMER2Q8N7J2 671 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 BEND2Q8NDZ0 799 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 BBS10Q8TAM1 723 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 CENPIQ92674 756 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 HOXB13Q92826 284 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 PEX11GQ96HA9 241 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 GGACTQ9BVM4 153 aa5.69□□□□□ -1.5
ECHDC1-215ENST00000475319 SORBS1Q9BX66 1292 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms