RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 POLR2J3Q9H1A7 115 aaKnown RBP20.03■□□□□ 0.8
COL18A1-207ENST00000473212 MGAT4BQ9UQ53 548 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 HEPACAM2A8MVW5 462 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 DDOSTP39656 456 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 HSPB3Q12988 150 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 MADCAM1Q13477 382 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 C12orf73Q69YU5 71 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 ERAP2Q6P179 960 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 UNC5DQ6UXZ4 953 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 C12orf40Q86WS4 652 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 MEX3DQ86XN8 651 aaKnown RBP20.03■□□□□ 0.8
COL18A1-207ENST00000473212 SLC30A8Q8IWU4 369 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 PHC2Q8IXK0 858 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 OR5AR1Q8NGP9 310 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 WDFY2Q96P53 400 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 ABCB9Q9NP78 766 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 NDOR1Q9UHB4 597 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 KLHL20Q9Y2M5 609 aa20.03■□□□□ 0.8
COL18A1-207ENST00000473212 CXorf51AA0A1B0GTR3 108 aa20.02■□□□□ 0.8
COL18A1-207ENST00000473212 MYL12BO14950 172 aa20.02■□□□□ 0.8
COL18A1-207ENST00000473212 LRRTM2O43300 516 aa20.02■□□□□ 0.8
COL18A1-207ENST00000473212 CLEC2LP0C7M8 214 aa20.02■□□□□ 0.8
COL18A1-207ENST00000473212 TNNI3P19429 210 aa20.02■□□□□ 0.8
COL18A1-207ENST00000473212 FAM131AQ6UXB0 335 aa20.02■□□□□ 0.8
COL18A1-207ENST00000473212 VASH1Q7L8A9 365 aaPredicted RBP20.02■□□□□ 0.8
COL18A1-207ENST00000473212 SFTPA1Q8IWL2 248 aa20.02■□□□□ 0.8
COL18A1-207ENST00000473212 TMEM203Q969S6 136 aa20.02■□□□□ 0.8
COL18A1-207ENST00000473212 F2RL3Q96RI0 385 aa20.02■□□□□ 0.8
COL18A1-207ENST00000473212 TTYH2Q9BSA4 534 aa20.02■□□□□ 0.8
COL18A1-207ENST00000473212 TMEM98Q9Y2Y6 226 aa20.02■□□□□ 0.8
COL18A1-207ENST00000473212 FEZF1A0PJY2 475 aa20.02■□□□□ 0.79
COL18A1-207ENST00000473212 PLPP1O14494 284 aa20.02■□□□□ 0.79
COL18A1-207ENST00000473212 SH3BP5O60239 455 aa20.02■□□□□ 0.79
COL18A1-207ENST00000473212 STATHP02808 62 aa20.02■□□□□ 0.79
COL18A1-207ENST00000473212 H1F0P07305 194 aaKnown RBP20.02■□□□□ 0.79
COL18A1-207ENST00000473212 CXCR2P25025 360 aa20.02■□□□□ 0.79
COL18A1-207ENST00000473212 PSMB5P28074 263 aa20.02■□□□□ 0.79
COL18A1-207ENST00000473212 TARDBPQ13148 414 aaKnown RBP eCLIP20.02■□□□□ 0.79
COL18A1-207ENST00000473212 MFSD4BQ5TF39 518 aa20.02■□□□□ 0.79
COL18A1-207ENST00000473212 RAET1GQ6H3X3 334 aa20.02■□□□□ 0.79
COL18A1-207ENST00000473212 PGBD2Q6P3X8 592 aa20.02■□□□□ 0.79
COL18A1-207ENST00000473212 ASCC1Q8N9N2 400 aaKnown RBP20.02■□□□□ 0.79
COL18A1-207ENST00000473212 PROKR2Q8NFJ6 384 aa20.02■□□□□ 0.79
COL18A1-207ENST00000473212 OR8J1Q8NGP2 316 aa20.02■□□□□ 0.79
COL18A1-207ENST00000473212 LRRC3BQ96PB8 259 aa20.02■□□□□ 0.79
COL18A1-207ENST00000473212 TVP23BQ9NYZ1 205 aa20.02■□□□□ 0.79
COL18A1-207ENST00000473212 RANBP2P49792 3224 aaKnown RBP20.01■□□□□ 0.79
COL18A1-207ENST00000473212 SLC35F4A4IF30 521 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 PPM1DO15297 605 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 ITGB7P26010 798 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 DMPKQ09013 629 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 HYAL2Q12891 473 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 HEPACAMQ14CZ8 416 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 ZNF697Q5TEC3 545 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 SLC39A5Q6ZMH5 540 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 GALNT12Q8IXK2 581 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 OR9Q1Q8NGQ5 310 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 DEPDC7Q96QD5 511 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 CUEDC1Q9NWM3 386 aaPredicted RBP20.01■□□□□ 0.79
COL18A1-207ENST00000473212 DOCK9Q9BZ29 2069 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 REV3LO60673 3130 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 IQCMA0A1B0GVH7 501 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 TSPAN11A1L157 253 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 TLX2O43763 284 aaPredicted RBP20.01■□□□□ 0.79
COL18A1-207ENST00000473212 MMP20O60882 483 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 MAPK9P45984 424 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 GSTM5P46439 218 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 SCN1BQ07699 218 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 MLLT11Q13015 90 aaPredicted RBP20.01■□□□□ 0.79
COL18A1-207ENST00000473212 C1DQ13901 141 aaKnown RBP20.01■□□□□ 0.79
COL18A1-207ENST00000473212 TMIGD1Q6UXZ0 262 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 USP30Q70CQ3 517 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 AMER3Q8N944 861 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 SLC25A46Q96AG3 418 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 DTD2Q96FN9 168 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 ZNF717Q9BY31 904 aaPredicted RBP20.01■□□□□ 0.79
COL18A1-207ENST00000473212 MIXL1Q9H2W2 232 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 CTPS2Q9NRF8 586 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 SEMA3GQ9NS98 782 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 TXNL4BQ9NX01 149 aaKnown RBP20.01■□□□□ 0.79
COL18A1-207ENST00000473212 KIAA1549LQ6ZVL6 1849 aa20.01■□□□□ 0.79
COL18A1-207ENST00000473212 NUMA1Q14980 2115 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 SMIM30A4D0T7 59 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 FAAHO00519 579 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 GUCY1B2O75343 617 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 POP7O75817 140 aaKnown RBP20■□□□□ 0.79
COL18A1-207ENST00000473212 FHP07954 510 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 CSF2RAP15509 400 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 ERVFC1P60507 584 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 HNRNPA0Q13151 305 aaKnown RBP20■□□□□ 0.79
COL18A1-207ENST00000473212 CDK10Q15131 360 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 SAXO2Q658L1 398 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 C22orf42Q6IC83 251 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 FAM92BQ6ZTR7 304 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 ANKRD53Q8N9V6 530 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 NEURL3Q96EH8 262 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 RACGAP1Q9H0H5 632 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 MVB12BQ9H7P6 319 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 PLSCR3Q9NRY6 295 aa20■□□□□ 0.79
COL18A1-207ENST00000473212 TM7SF3Q9NS93 570 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms