RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 FBXW2Q9UKT8 454 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 DAPP1Q9UN19 280 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 TRAF6Q9Y4K3 522 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 DNAJC15Q9Y5T4 150 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 COPG1Q9Y678 874 aaKnown RBP8.56□□□□□ -1.04
SMC4-213ENST00000472282 COL12A1Q99715 3063 aa8.56□□□□□ -1.04
SMC4-213ENST00000472282 CNTRLQ7Z7A1 2325 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 IGHV1-45A0A0A0MS14 117 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 IGHV3-20A0A0C4DH32 117 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 FAM227AF5H4B4 570 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 DYNC1I1O14576 645 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 PIP5K1BO14986 540 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 ATP8B1O43520 1251 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 TMPRSS11DO60235 418 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 B4GALT2O60909 372 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 SNNO75324 88 aaPredicted RBP8.55□□□□□ -1.04
SMC4-213ENST00000472282 CHEK2O96017 543 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 F10P00742 488 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 GBAP04062 536 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 KLK1P06870 262 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 HEXBP07686 556 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 FGF4P08620 206 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 JAK1P23458 1154 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 TPP2P29144 1249 aaPredicted RBP8.55□□□□□ -1.04
SMC4-213ENST00000472282 IDH3AP50213 366 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 HNRNPFP52597 415 aaKnown RBP8.55□□□□□ -1.04
SMC4-213ENST00000472282 EMP2P54851 167 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 HNRNPH2P55795 449 aaKnown RBP8.55□□□□□ -1.04
SMC4-213ENST00000472282 BTKQ06187 659 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 TBL3Q12788 808 aaKnown RBP8.55□□□□□ -1.04
SMC4-213ENST00000472282 SLAMF1Q13291 335 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 PCOLCEQ15113 449 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 UGT3A2Q3SY77 523 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 HSP90B2PQ58FF3 399 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 SPDYAQ5MJ70 313 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 AGAP7PQ5VUJ5 663 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 ATG16L1Q676U5 607 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 B3GNTL1Q67FW5 361 aaPredicted RBP8.55□□□□□ -1.04
SMC4-213ENST00000472282 CYP20A1Q6UW02 462 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 PAGE2Q7Z2X7 111 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 TRIM42Q8IWZ5 723 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 DDIASQ8IXT1 998 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 ZCCHC7Q8N3Z6 543 aaKnown RBP8.55□□□□□ -1.04
SMC4-213ENST00000472282 SIRT6Q8N6T7 355 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 TMEM52Q8NDY8 209 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 DNAJB14Q8TBM8 379 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 RAB3IL1Q8TBN0 382 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 BRIX1Q8TDN6 353 aaKnown RBP8.55□□□□□ -1.04
SMC4-213ENST00000472282 ADAMTS18Q8TE60 1221 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 GRHL3Q8TE85 626 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 DYDC1Q8WWB3 177 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 TM9SF4Q92544 642 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 TSLPQ969D9 159 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 APIPQ96GX9 242 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 AGAP4Q96P64 663 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 DDX31Q9H8H2 851 aaKnown RBP8.55□□□□□ -1.04
SMC4-213ENST00000472282 MANSC1Q9H8J5 431 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 LYRM4Q9HD34 91 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 MED4Q9NPJ6 270 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 INTS9Q9NV88 658 aaKnown RBP8.55□□□□□ -1.04
SMC4-213ENST00000472282 NMRK1Q9NWW6 199 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 LYARQ9NX58 379 aaKnown RBP8.55□□□□□ -1.04
SMC4-213ENST00000472282 PLA2G3Q9NZ20 509 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 PTGFRNQ9P2B2 879 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 VPS29Q9UBQ0 182 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 RAP2CQ9Y3L5 183 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 NUP214P35658 2090 aaPredicted RBP8.55□□□□□ -1.04
SMC4-213ENST00000472282 CACNA1DQ01668 2161 aa8.55□□□□□ -1.04
SMC4-213ENST00000472282 LOC102723996A0A087X1L8 192 aa8.54□□□□□ -1.04
SMC4-213ENST00000472282 NSG1A0A0A6YYJ2 146 aa8.54□□□□□ -1.04
SMC4-213ENST00000472282 A0A1W2PQ72 361 aa8.54□□□□□ -1.04
SMC4-213ENST00000472282 ARHGAP10A1A4S6 786 aa8.54□□□□□ -1.04
SMC4-213ENST00000472282 ANKUB1A6NFN9 424 aa8.54□□□□□ -1.04
SMC4-213ENST00000472282 CYR61O00622 381 aa8.54□□□□□ -1.04
SMC4-213ENST00000472282 RGS14O43566 566 aa8.54□□□□□ -1.04
SMC4-213ENST00000472282 PCDH7O60245 1069 aa8.54□□□□□ -1.04
SMC4-213ENST00000472282 PRKRAO75569 313 aaKnown RBP8.54□□□□□ -1.04
SMC4-213ENST00000472282 RSL1D1O76021 490 aaKnown RBP8.54□□□□□ -1.04
SMC4-213ENST00000472282 SNUPNO95149 360 aaKnown RBP8.54□□□□□ -1.04
SMC4-213ENST00000472282 CLDN1O95832 211 aa8.54□□□□□ -1.04
SMC4-213ENST00000472282 LDLRP01130 860 aa8.54□□□□□ -1.04
SMC4-213ENST00000472282 JUNP05412 331 aaKnown RBP8.54□□□□□ -1.04
SMC4-213ENST00000472282 FAM58BPP0C7Q3 252 aa8.54□□□□□ -1.04
SMC4-213ENST00000472282 LINC00032P0C843 101 aa8.54□□□□□ -1.04
SMC4-213ENST00000472282 PRR35P0CG20 571 aa8.54□□□□□ -1.04
SMC4-213ENST00000472282 ITGAMP11215 1152 aa8.54□□□□□ -1.04
SMC4-213ENST00000472282 IL10P22301 178 aa8.54□□□□□ -1.04
SMC4-213ENST00000472282 CPN2P22792 545 aa8.54□□□□□ -1.04
SMC4-213ENST00000472282 ST13P50502 369 aaKnown RBP8.54□□□□□ -1.04
SMC4-213ENST00000472282 RAE1P78406 368 aaKnown RBP8.54□□□□□ -1.04
SMC4-213ENST00000472282 BTG2P78543 158 aa8.54□□□□□ -1.04
SMC4-213ENST00000472282 RHAGQ02094 409 aa8.54□□□□□ -1.04
SMC4-213ENST00000472282 TNFRSF17Q02223 184 aa8.54□□□□□ -1.04
SMC4-213ENST00000472282 ACSM2AQ08AH3 577 aa8.54□□□□□ -1.04
SMC4-213ENST00000472282 MFAP5Q13361 173 aa8.54□□□□□ -1.04
SMC4-213ENST00000472282 ZNF169Q14929 603 aaPredicted RBP8.54□□□□□ -1.04
SMC4-213ENST00000472282 PDCD2Q16342 344 aaPredicted RBP8.54□□□□□ -1.04
SMC4-213ENST00000472282 SPIN4Q56A73 249 aa8.54□□□□□ -1.04
SMC4-213ENST00000472282 XKR7Q5GH72 579 aa8.54□□□□□ -1.04
SMC4-213ENST00000472282 CCNYL2Q5T2Q4 361 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms