RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 CPNE1Q99829 537 aa8.27□□□□□ -1.09
SYNGAP1-205ENST00000470232 THTPAQ9BU02 230 aa8.27□□□□□ -1.09
SYNGAP1-205ENST00000470232 TMEM184CQ9NVA4 438 aa8.27□□□□□ -1.09
SYNGAP1-205ENST00000470232 PIH1D1Q9NWS0 290 aaKnown RBP8.27□□□□□ -1.09
SYNGAP1-205ENST00000470232 HPF1Q9NWY4 346 aa8.27□□□□□ -1.09
SYNGAP1-205ENST00000470232 BFARQ9NZS9 450 aa8.27□□□□□ -1.09
SYNGAP1-205ENST00000470232 STX18Q9P2W9 335 aaKnown RBP8.27□□□□□ -1.09
SYNGAP1-205ENST00000470232 MID2Q9UJV3 735 aa8.27□□□□□ -1.09
SYNGAP1-205ENST00000470232 FBXW2Q9UKT8 454 aa8.27□□□□□ -1.09
SYNGAP1-205ENST00000470232 RIMKLBQ9ULI2 386 aa8.27□□□□□ -1.09
SYNGAP1-205ENST00000470232 YARS2Q9Y2Z4 477 aaKnown RBP8.27□□□□□ -1.09
SYNGAP1-205ENST00000470232 SCN3AQ9NY46 2000 aa8.27□□□□□ -1.09
SYNGAP1-205ENST00000470232 A6NHS1 94 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 CLCA1A8K7I4 914 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 H7BY64 318 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 PFDN6O15212 129 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 HCN1O60741 890 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 FKBP6O75344 327 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 RDH16O75452 317 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 CRLF1O75462 422 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 NDUFS3O75489 264 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 ITGA10O75578 1167 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 MATN4O95460 622 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 CATP04040 527 aaKnown RBP8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 CNR1P21554 472 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 BMP5P22003 454 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 TYK2P29597 1187 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 GRK3P35626 688 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 CDH17Q12864 832 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 PCLAFQ15004 111 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 SF3B4Q15427 424 aaKnown RBP eCLIP8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 CCDC153Q494R4 210 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 CFAP157Q5JU67 520 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 TSTD2Q5T7W7 516 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 CES3Q6UWW8 571 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 PRSS41Q7RTY9 318 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 MDGA2Q7Z553 956 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 MYLK4Q86YV6 388 aaPredicted RBP8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 KRTAP1-3Q8IUG1 177 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 PLD3Q8IV08 490 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 C10orf107Q8IVU9 208 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 ULK2Q8IYT8 1036 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 FAM109AQ8N4B1 249 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 OR2M7Q8NG81 312 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 OR52K1Q8NGK4 314 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 OR13J1Q8NGT2 312 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 PIWIL2Q8TC59 973 aaKnown RBP8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 SLC13A3Q8WWT9 602 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 TSLPQ969D9 159 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 ZNF778Q96MU6 729 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 PRAP1Q96NZ9 151 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 FAM173AQ9BQD7 235 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 EBF4Q9BQW3 602 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 TTTY12Q9BZ98 90 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 IL1RL2Q9HB29 575 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 SNX15Q9NRS6 342 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 LANCL2Q9NS86 450 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 CATSPERZQ9NTU4 200 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 PNPOQ9NVS9 261 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 NDE1Q9NXR1 346 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 KCMF1Q9P0J7 381 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 ZNF629Q9UEG4 869 aaPredicted RBP8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 TRPS1Q9UHF7 1281 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 LRCH1Q9Y2L9 728 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 NAALAD2Q9Y3Q0 740 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 PCDHGB3Q9Y5G1 929 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 SLC22A7Q9Y694 548 aa8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.26□□□□□ -1.09
SYNGAP1-205ENST00000470232 TRBV11-1A0A0K0K1C0 115 aa8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 KRT87PA6NCN2 255 aa8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 TMEM114B3SHH9 223 aa8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 H3BMM5 538 aa8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 CASKO14936 926 aa8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 CD3EAPO15446 510 aaKnown RBP8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 DNAJB6O75190 326 aa8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 H2AFYO75367 372 aaKnown RBP8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 HSPA4LO95757 839 aa8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 BAG2O95816 211 aa8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 IL2RAP01589 272 aa8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 ALDOAP04075 364 aaKnown RBP8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 SLC35G6P0C7Q6 338 aa8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 CPA3P15088 417 aa8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 ANPEPP15144 967 aa8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 RPS3P23396 243 aaKnown RBP eCLIP8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 NPY2RP49146 381 aa8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 IDH3AP50213 366 aa8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 SORDQ00796 357 aa8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 FRG1Q14331 258 aaKnown RBP8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 C1orf146Q5VVC0 180 aa8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 HMBOX1Q6NT76 420 aa8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 TMEM154Q6P9G4 183 aa8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 IL20RBQ6UXL0 311 aa8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 QSOX2Q6ZRP7 698 aa8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 STRA8Q7Z7C7 330 aa8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 ASPGQ86U10 573 aa8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 CIARTQ8N365 385 aaPredicted RBP8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 FBXW8Q8N3Y1 598 aa8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 FBXO27Q8NI29 283 aa8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 ZCCHC10Q8TBK6 192 aa8.25□□□□□ -1.09
SYNGAP1-205ENST00000470232 NRG4Q8WWG1 115 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms