RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 SHHQ15465 462 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 TIGD6Q17RP2 521 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 ZNF829Q3KNS6 432 aaPredicted RBP14.38□□□□□ -0.11
LIMS2-213ENST00000469300 ZSWIM9Q86XI8 627 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 TREML1Q86YW5 311 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 CHST4Q8NCG5 386 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 OR5M3Q8NGP4 307 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 DHRS4Q9BTZ2 278 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 ASB6Q9NWX5 421 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 MAU2Q9Y6X3 613 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 SH3PXD2BA1X283 911 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 FARS2O95363 451 aaKnown RBP14.38□□□□□ -0.11
LIMS2-213ENST00000469300 HMGA1P17096 107 aaKnown RBP14.38□□□□□ -0.11
LIMS2-213ENST00000469300 HSD11B1P28845 292 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 TRA2BP62995 288 aaKnown RBP14.38□□□□□ -0.11
LIMS2-213ENST00000469300 SEMA3BQ13214 749 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 MLF2Q15773 248 aaPredicted RBP14.38□□□□□ -0.11
LIMS2-213ENST00000469300 USP43Q70EL4 1123 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 TMEM173Q86WV6 379 aaPredicted RBP14.38□□□□□ -0.11
LIMS2-213ENST00000469300 OR2L5Q8NG80 312 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 PTERQ96BW5 349 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 MAGIXQ9H6Y5 334 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 PPP4R1LQ9P1A2 415 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 PCDHGB2Q9Y5G2 931 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 CNTRLQ7Z7A1 2325 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 ZNF879B4DU55 563 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 RTCAO00442 366 aaKnown RBP14.38□□□□□ -0.11
LIMS2-213ENST00000469300 PRAMEF2O60811 474 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 IL1RNP18510 177 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 NSDHLQ15738 373 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 OR52P1PQ8NH57 321 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 PIP5K1AQ99755 562 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 SEC61A2Q9H9S3 476 aa14.38□□□□□ -0.11
LIMS2-213ENST00000469300 AURKAO14965 403 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 SDC3O75056 442 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 CDC123O75794 336 aaPredicted RBP14.37□□□□□ -0.11
LIMS2-213ENST00000469300 NR0B2Q15466 257 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 ATP6AP1Q15904 470 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 NDUFAF5Q5TEU4 345 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 GID4Q8IVV7 300 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 PJA1Q8NG27 643 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 OR4C15Q8NGM1 316 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 RHBDD1Q8TEB9 315 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 PIK3R3Q92569 461 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 ELSPBP1Q96BH3 223 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 SH3YL1Q96HL8 342 aaPredicted RBP14.37□□□□□ -0.11
LIMS2-213ENST00000469300 GSTO2Q9H4Y5 243 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 SDR39U1Q9NRG7 319 aaPredicted RBP14.37□□□□□ -0.11
LIMS2-213ENST00000469300 CCM2LQ9NUG4 571 aaPredicted RBP14.37□□□□□ -0.11
LIMS2-213ENST00000469300 AP1M2Q9Y6Q5 423 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 PAPPAQ13219 1627 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 BLACEA4D250 179 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 YES1P07947 543 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 CLCN2P51788 898 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 PER3P56645 1201 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 PGBD2Q6P3X8 592 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 QSOX2Q6ZRP7 698 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 CCDC28AQ8IWP9 274 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 TANKQ92844 425 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 PRSS16Q9NQE7 514 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 BLOC1S5-TXNDC5H3BN57 136 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 SLC22A1O15245 554 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 YKT6O15498 198 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 GPR37L1O60883 481 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 OXSR1O95747 527 aaPredicted RBP14.37□□□□□ -0.11
LIMS2-213ENST00000469300 RHCEP18577 417 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 SHC2P98077 582 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 MLLT1Q03111 559 aaPredicted RBP14.37□□□□□ -0.11
LIMS2-213ENST00000469300 LRIF1Q5T3J3 769 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 ASB11Q8WXH4 323 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 SLC22A12Q96S37 553 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 MND1Q9BWT6 205 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 MED28Q9H204 178 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 NOX1Q9Y5S8 564 aa14.37□□□□□ -0.11
LIMS2-213ENST00000469300 SOX1O00570 391 aaPredicted RBP14.36□□□□□ -0.11
LIMS2-213ENST00000469300 PRODHO43272 600 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 SOX9P48436 509 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 CTSCP53634 463 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 CLDN2P57739 230 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 MTHFD2LQ9H903 347 aaPredicted RBP14.36□□□□□ -0.11
LIMS2-213ENST00000469300 SDK1Q7Z5N4 2213 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 MYO18AQ92614 2054 aaKnown RBP14.36□□□□□ -0.11
LIMS2-213ENST00000469300 HPRP00739 348 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 HLA-DPB1P04440 258 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 HSD17B1P14061 328 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 FMO3P31513 532 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 CCR7P32248 378 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 CTBSQ01459 385 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 DSG2Q14126 1118 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 KCTD11Q693B1 232 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 TMEM107Q6UX40 140 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 HSDL2Q6YN16 418 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.36□□□□□ -0.11
LIMS2-213ENST00000469300 LRRC46Q96FV0 321 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 PEX11GQ96HA9 241 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 KCTD7Q96MP8 289 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 EPHX3Q9H6B9 360 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 BTNL2Q9UIR0 455 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 MROH6A6NGR9 719 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 NR4A1P22736 598 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms