RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 GPC1P35052 558 aa17.24■□□□□ 0.35
COL9A3-205ENST00000466192 RAPSNQ13702 412 aa17.24■□□□□ 0.35
COL9A3-205ENST00000466192 COL9A2Q14055 689 aaPredicted RBP17.24■□□□□ 0.35
COL9A3-205ENST00000466192 RPS26P11Q5JNZ5 115 aaPredicted RBP17.24■□□□□ 0.35
COL9A3-205ENST00000466192 C6orf141Q5SZD1 244 aa17.24■□□□□ 0.35
COL9A3-205ENST00000466192 REEP3Q6NUK4 255 aa17.24■□□□□ 0.35
COL9A3-205ENST00000466192 SLC38A5Q8WUX1 472 aa17.24■□□□□ 0.35
COL9A3-205ENST00000466192 RSC1A1Q92681 617 aa17.24■□□□□ 0.35
COL9A3-205ENST00000466192 EPYCQ99645 322 aa17.24■□□□□ 0.35
COL9A3-205ENST00000466192 ZFYVE21Q9BQ24 234 aa17.24■□□□□ 0.35
COL9A3-205ENST00000466192 POLR1BQ9H9Y6 1135 aa17.24■□□□□ 0.35
COL9A3-205ENST00000466192 KRT84Q9NSB2 600 aa17.24■□□□□ 0.35
COL9A3-205ENST00000466192 LYARQ9NX58 379 aaKnown RBP17.24■□□□□ 0.35
COL9A3-205ENST00000466192 RSL24D1Q9UHA3 163 aaKnown RBP17.24■□□□□ 0.35
COL9A3-205ENST00000466192 SH3GLB1Q9Y371 365 aa17.24■□□□□ 0.35
COL9A3-205ENST00000466192 PCDHGB3Q9Y5G1 929 aa17.24■□□□□ 0.35
COL9A3-205ENST00000466192 THADAQ6YHU6 1953 aa17.24■□□□□ 0.35
COL9A3-205ENST00000466192 A0A0J9YY10 115 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 HMGN4O00479 90 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 DPM1O60762 260 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 IFNA14P01570 189 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 BCHEP06276 602 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 C8orf89P0DMQ9 161 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 TYRP1P17643 537 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 AGXTP21549 392 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 RPL6Q02878 288 aaKnown RBP17.23■□□□□ 0.35
COL9A3-205ENST00000466192 PMS2P3Q13401 168 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 ELOAQ14241 798 aaKnown RBP17.23■□□□□ 0.35
COL9A3-205ENST00000466192 NEDD8Q15843 81 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 RBM48Q5RL73 367 aaKnown RBP17.23■□□□□ 0.35
COL9A3-205ENST00000466192 B3GNT6Q6ZMB0 384 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 CCDC116Q8IYX3 515 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 CADM4Q8NFZ8 388 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 OR52J3Q8NH60 311 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 KLHL6Q8WZ60 621 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 SGCDQ92629 289 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 HDAC2Q92769 488 aaKnown RBP17.23■□□□□ 0.35
COL9A3-205ENST00000466192 A4GALTQ9NPC4 353 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 DDX18Q9NVP1 670 aaKnown RBP17.23■□□□□ 0.35
COL9A3-205ENST00000466192 PTTG2Q9NZH5 202 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 SDK1Q7Z5N4 2213 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 OR5K3A6NET4 321 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 H0YGG7 62 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 JRKO75564 520 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 TFPTP0C1Z6 253 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 NME1P15531 152 aaKnown RBP17.23■□□□□ 0.35
COL9A3-205ENST00000466192 FEN1P39748 380 aaKnown RBP17.23■□□□□ 0.35
COL9A3-205ENST00000466192 RXRGP48443 463 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 RGS19P49795 217 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 MAZP56270 477 aaKnown RBP17.23■□□□□ 0.35
COL9A3-205ENST00000466192 ARF3P61204 181 aaPredicted RBP17.23■□□□□ 0.35
COL9A3-205ENST00000466192 RELAQ04206 551 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 MAPK11Q15759 364 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 DEFB134Q4QY38 66 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 GPR153Q6NV75 609 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 SPEM1Q8N4L4 309 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 THAP11Q96EK4 314 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 MIR1-1HGQ9H1L0 117 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 TBC1D17Q9HA65 648 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 ZNF451Q9Y4E5 1061 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 LYVE1Q9Y5Y7 322 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 TMEM131Q92545 1883 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 VCANP13611 3396 aa17.23■□□□□ 0.35
COL9A3-205ENST00000466192 C5orf58C9J3I9 102 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 TLR4O00206 839 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 TNFRSF11BO00300 401 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 ADAMDEC1O15204 470 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 DNAJB6O75190 326 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 UGT2B11O75310 529 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 EPHA2P29317 976 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 CLK3P49761 638 aaKnown RBP17.22■□□□□ 0.35
COL9A3-205ENST00000466192 RACK1P63244 317 aaKnown RBP17.22■□□□□ 0.35
COL9A3-205ENST00000466192 IL5RAQ01344 420 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 ZP2Q05996 745 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 DUSP7Q16829 419 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 ZBED5Q49AG3 693 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 LAIR2Q6ISS4 152 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 ZNF773Q6PK81 442 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 OOSP2Q86WS3 158 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 SLC30A8Q8IWU4 369 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 GJD3Q8N144 294 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 TTC29Q8NA56 475 aaPredicted RBP17.22■□□□□ 0.35
COL9A3-205ENST00000466192 CAMKVQ8NCB2 501 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 MPP4Q96JB8 637 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 MAGED4Q96JG8 741 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 ZNF300Q96RE9 604 aaPredicted RBP17.22■□□□□ 0.35
COL9A3-205ENST00000466192 ZCCHC3Q9NUD5 404 aaKnown RBP17.22■□□□□ 0.35
COL9A3-205ENST00000466192 KCMF1Q9P0J7 381 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 ENTPD4Q9Y227 616 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 MRPS2Q9Y399 296 aaKnown RBP17.22■□□□□ 0.35
COL9A3-205ENST00000466192 J3KTA2 159 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 NR2F6P10588 404 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 PCSK6P29122 969 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 SLC5A2P31639 672 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 RANBP1P43487 201 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 CDH12P55289 794 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 SPIBQ01892 262 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 LSAMPQ13449 338 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 IL18R1Q13478 541 aa17.22■□□□□ 0.35
COL9A3-205ENST00000466192 SUZ12Q15022 739 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms