RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 FAM46DQ8NEK8 389 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 FLCNQ8NFG4 579 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 XAGE5Q8WWM1 108 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 SLC9A6Q92581 669 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 NACC2Q96BF6 587 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 ARMC5Q96C12 935 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 TCEAL4Q96EI5 215 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 IL17FQ96PD4 163 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 SNX18Q96RF0 628 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 SRRQ9GZT4 340 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 NXF2Q9GZY0 626 aaKnown RBP11.81□□□□□ -0.52
HDAC4-208ENST00000463007 KCNK12Q9HB15 430 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 PLCXD1Q9NUJ7 323 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 DENND4AQ7Z401 1863 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 CHD9Q3L8U1 2897 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 A0A1W2PRB8 838 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 M0R3H8 397 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 FFAR1O14842 300 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 KIAA0355O15063 1070 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 ICMTO60725 284 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 EFCAB14O75071 495 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 ZNF8P17098 575 aaPredicted RBP11.81□□□□□ -0.52
HDAC4-208ENST00000463007 PCGF2P35227 344 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 CD79BP40259 229 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 AVPR1BP47901 424 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 RPS25P62851 125 aaKnown RBP11.81□□□□□ -0.52
HDAC4-208ENST00000463007 PSPHP78330 225 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 HYAL2Q12891 473 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 SP140Q13342 867 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 SLBPQ14493 270 aaKnown RBP eCLIP11.81□□□□□ -0.52
HDAC4-208ENST00000463007 OR52P1PQ8NH57 321 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 C11orf24Q96F05 449 aaPredicted RBP11.81□□□□□ -0.52
HDAC4-208ENST00000463007 NELL2Q99435 816 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 SPNS1Q9H2V7 528 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 SEMA3GQ9NS98 782 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 MCUBQ9NWR8 336 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 TXNL4BQ9NX01 149 aaKnown RBP11.81□□□□□ -0.52
HDAC4-208ENST00000463007 EXO1Q9UQ84 846 aaKnown RBP11.81□□□□□ -0.52
HDAC4-208ENST00000463007 SCN3AQ9NY46 2000 aa11.81□□□□□ -0.52
HDAC4-208ENST00000463007 A0A0X1KG70 313 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 HPGDSO60760 199 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 C8GP07360 202 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 IL3P08700 152 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 SLC2A2P11168 524 aaPredicted RBP11.8□□□□□ -0.52
HDAC4-208ENST00000463007 ITGA2P17301 1181 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 ATP6V1E1P36543 226 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 ETV5P41161 510 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 CRYBB2P43320 205 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 ETV1P50549 477 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 VASPP50552 380 aaPredicted RBP11.8□□□□□ -0.52
HDAC4-208ENST00000463007 PCDH1Q08174 1060 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 PUM1Q14671 1186 aaKnown RBP eCLIP11.8□□□□□ -0.52
HDAC4-208ENST00000463007 ZNF77Q15935 545 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 DCST1Q5T197 706 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 EXOSC8Q96B26 276 aaKnown RBP11.8□□□□□ -0.52
HDAC4-208ENST00000463007 OMA1Q96E52 524 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 TMEM80Q96HE8 168 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 LRR1Q96L50 414 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 WRAP53Q9BUR4 548 aaKnown RBP11.8□□□□□ -0.52
HDAC4-208ENST00000463007 CCDC32Q9BV29 185 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 RIOK2Q9BVS4 552 aaKnown RBP11.8□□□□□ -0.52
HDAC4-208ENST00000463007 TRIM45Q9H8W5 580 aaPredicted RBP11.8□□□□□ -0.52
HDAC4-208ENST00000463007 BEX1Q9HBH7 125 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 GALNT9Q9HCQ5 603 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 STOX2Q9P2F5 926 aaPredicted RBP11.8□□□□□ -0.52
HDAC4-208ENST00000463007 ZNF282Q9UDV7 671 aaPredicted RBP11.8□□□□□ -0.52
HDAC4-208ENST00000463007 KIF26AQ9ULI4 1882 aaPredicted RBP11.8□□□□□ -0.52
HDAC4-208ENST00000463007 GLOD5A6NK44 160 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 FAM25AB3EWG3 89 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 FAM25CB3EWG5 89 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 FAM25GB3EWG6 89 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 SLC16A5O15375 505 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 ARHGEF9O43307 516 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 FRS3O43559 492 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 CSTF2P33240 577 aaKnown RBP eCLIP11.8□□□□□ -0.52
HDAC4-208ENST00000463007 SOX18P35713 384 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 SNAPC1Q16533 368 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 PLEKHS1Q5SXH7 462 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 HENMT1Q5T8I9 393 aaKnown RBP11.8□□□□□ -0.52
HDAC4-208ENST00000463007 SAXO2Q658L1 398 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 TRIM40Q6P9F5 258 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 PHC2Q8IXK0 858 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 Q8N402 240 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 ASZ1Q8WWH4 475 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 GEMIN6Q8WXD5 167 aaKnown RBP11.8□□□□□ -0.52
HDAC4-208ENST00000463007 DEDD2Q8WXF8 326 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 HDHD2Q9H0R4 259 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 CDCP1Q9H5V8 836 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 MVB12BQ9H7P6 319 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 RNF121Q9H920 327 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 ASAH2Q9NR71 780 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 MARK1Q9P0L2 795 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 RANBP2P49792 3224 aaKnown RBP11.8□□□□□ -0.52
HDAC4-208ENST00000463007 ATG2BQ96BY7 2078 aa11.8□□□□□ -0.52
HDAC4-208ENST00000463007 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.79□□□□□ -0.52
HDAC4-208ENST00000463007 HMX3A6NHT5 357 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 ISM1B1AKI9 464 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 ZNF197O14709 1029 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 PRKYO43930 277 aa11.79□□□□□ -0.52
HDAC4-208ENST00000463007 ALX3O95076 343 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms