RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 ZNF490Q9ULM2 529 aaPredicted RBP21.23■□□□□ 0.99
PTPRA-208ENST00000455631 ERVK-19Q9WJR5 959 aa21.23■□□□□ 0.99
PTPRA-208ENST00000455631 C15orf41Q9Y2V0 281 aa21.23■□□□□ 0.99
PTPRA-208ENST00000455631 FBN1P35555 2871 aaKnown RBP21.23■□□□□ 0.99
PTPRA-208ENST00000455631 ANKRD33BA6NCL7 494 aa21.22■□□□□ 0.99
PTPRA-208ENST00000455631 CLGNO14967 610 aa21.22■□□□□ 0.99
PTPRA-208ENST00000455631 ZNF460Q14592 562 aa21.22■□□□□ 0.99
PTPRA-208ENST00000455631 RPS6KA2Q15349 733 aa21.22■□□□□ 0.99
PTPRA-208ENST00000455631 TSNQ15631 228 aaKnown RBP21.22■□□□□ 0.99
PTPRA-208ENST00000455631 EIPR1Q53HC9 387 aa21.22■□□□□ 0.99
PTPRA-208ENST00000455631 WIPI1Q5MNZ9 446 aaPredicted RBP21.22■□□□□ 0.99
PTPRA-208ENST00000455631 TEDDM1Q5T9Z0 273 aa21.22■□□□□ 0.99
PTPRA-208ENST00000455631 RNF111Q6ZNA4 994 aa21.22■□□□□ 0.99
PTPRA-208ENST00000455631 ADAMTSL2Q86TH1 951 aa21.22■□□□□ 0.99
PTPRA-208ENST00000455631 PPIL6Q8IXY8 311 aa21.22■□□□□ 0.99
PTPRA-208ENST00000455631 NKAPQ8N5F7 415 aaKnown RBP21.22■□□□□ 0.99
PTPRA-208ENST00000455631 SRFBP1Q8NEF9 429 aaKnown RBP21.22■□□□□ 0.99
PTPRA-208ENST00000455631 ANKRD7Q92527 254 aa21.22■□□□□ 0.99
PTPRA-208ENST00000455631 ABTB1Q969K4 478 aaPredicted RBP21.22■□□□□ 0.99
PTPRA-208ENST00000455631 GNRHR2Q96P88 292 aa21.22■□□□□ 0.99
PTPRA-208ENST00000455631 TBCDQ9BTW9 1192 aa21.22■□□□□ 0.99
PTPRA-208ENST00000455631 SFXN3Q9BWM7 321 aa21.22■□□□□ 0.99
PTPRA-208ENST00000455631 EHD1Q9H4M9 534 aa21.22■□□□□ 0.99
PTPRA-208ENST00000455631 UBTD1Q9HAC8 227 aa21.22■□□□□ 0.99
PTPRA-208ENST00000455631 NDRG3Q9UGV2 375 aa21.22■□□□□ 0.99
PTPRA-208ENST00000455631 TP53I11O14683 189 aa21.21■□□□□ 0.99
PTPRA-208ENST00000455631 PRAMEF4O60810 478 aa21.21■□□□□ 0.99
PTPRA-208ENST00000455631 HIST1H1TP22492 207 aaPredicted RBP21.21■□□□□ 0.99
PTPRA-208ENST00000455631 CPOXP36551 454 aa21.21■□□□□ 0.99
PTPRA-208ENST00000455631 FBXW4P57775 412 aa21.21■□□□□ 0.99
PTPRA-208ENST00000455631 CBLBQ13191 982 aa21.21■□□□□ 0.99
PTPRA-208ENST00000455631 EBPQ15125 230 aaKnown RBP21.21■□□□□ 0.99
PTPRA-208ENST00000455631 PRAMEF9Q5VWM5 478 aa21.21■□□□□ 0.99
PTPRA-208ENST00000455631 TMEM64Q6YI46 380 aa21.21■□□□□ 0.99
PTPRA-208ENST00000455631 PACS2Q86VP3 889 aa21.21■□□□□ 0.99
PTPRA-208ENST00000455631 TAGAPQ8N103 731 aa21.21■□□□□ 0.99
PTPRA-208ENST00000455631 SNX31Q8N9S9 440 aa21.21■□□□□ 0.99
PTPRA-208ENST00000455631 BBOF1Q8ND07 529 aa21.21■□□□□ 0.99
PTPRA-208ENST00000455631 PTCD3Q96EY7 689 aaKnown RBP21.21■□□□□ 0.99
PTPRA-208ENST00000455631 KRT12Q99456 494 aa21.21■□□□□ 0.99
PTPRA-208ENST00000455631 DNAJC11Q9NVH1 559 aa21.21■□□□□ 0.99
PTPRA-208ENST00000455631 WWOXQ9NZC7 414 aa21.21■□□□□ 0.99
PTPRA-208ENST00000455631 CTNNAL1Q9UBT7 734 aa21.21■□□□□ 0.99
PTPRA-208ENST00000455631 TESMINQ9Y4I5 508 aa21.21■□□□□ 0.99
PTPRA-208ENST00000455631 IKBKGQ9Y6K9 419 aa21.21■□□□□ 0.99
PTPRA-208ENST00000455631 SH3BGRLO75368 114 aa21.2■□□□□ 0.98
PTPRA-208ENST00000455631 SNX4O95219 450 aa21.2■□□□□ 0.98
PTPRA-208ENST00000455631 CYP4B1P13584 511 aa21.2■□□□□ 0.98
PTPRA-208ENST00000455631 ALOX15P16050 662 aaPredicted RBP21.2■□□□□ 0.98
PTPRA-208ENST00000455631 SSR2P43308 183 aa21.2■□□□□ 0.98
PTPRA-208ENST00000455631 SLCO1A2P46721 670 aa21.2■□□□□ 0.98
PTPRA-208ENST00000455631 DOC2AQ14183 400 aa21.2■□□□□ 0.98
PTPRA-208ENST00000455631 ZNF267Q14586 743 aaPredicted RBP21.2■□□□□ 0.98
PTPRA-208ENST00000455631 AP5B1Q2VPB7 878 aa21.2■□□□□ 0.98
PTPRA-208ENST00000455631 FBXO48Q5FWF7 155 aa21.2■□□□□ 0.98
PTPRA-208ENST00000455631 FNDC7Q5VTL7 733 aa21.2■□□□□ 0.98
PTPRA-208ENST00000455631 CCDC137Q6PK04 289 aaKnown RBP21.2■□□□□ 0.98
PTPRA-208ENST00000455631 SLC44A1Q8WWI5 657 aa21.2■□□□□ 0.98
PTPRA-208ENST00000455631 TMEM79Q9BSE2 394 aa21.2■□□□□ 0.98
PTPRA-208ENST00000455631 MS4A8Q9BY19 250 aa21.2■□□□□ 0.98
PTPRA-208ENST00000455631 RPF2Q9H7B2 306 aaKnown RBP21.2■□□□□ 0.98
PTPRA-208ENST00000455631 RYDENQ9NUL5 291 aaKnown RBP21.2■□□□□ 0.98
PTPRA-208ENST00000455631 TEX10Q9NXF1 929 aaPredicted RBP21.2■□□□□ 0.98
PTPRA-208ENST00000455631 CAPN14A8MX76 684 aa21.19■□□□□ 0.98
PTPRA-208ENST00000455631 CD22P20273 847 aa21.19■□□□□ 0.98
PTPRA-208ENST00000455631 FPR1P21462 350 aa21.19■□□□□ 0.98
PTPRA-208ENST00000455631 SOX18P35713 384 aa21.19■□□□□ 0.98
PTPRA-208ENST00000455631 RNASEH2BQ5TBB1 312 aaKnown RBP21.19■□□□□ 0.98
PTPRA-208ENST00000455631 SPPL2AQ8TCT8 520 aa21.19■□□□□ 0.98
PTPRA-208ENST00000455631 ZPLD1Q8TCW7 415 aa21.19■□□□□ 0.98
PTPRA-208ENST00000455631 INTS12Q96CB8 462 aaKnown RBP21.19■□□□□ 0.98
PTPRA-208ENST00000455631 NTNG2Q96CW9 530 aa21.19■□□□□ 0.98
PTPRA-208ENST00000455631 ZFP3Q96NJ6 502 aa21.19■□□□□ 0.98
PTPRA-208ENST00000455631 NAT9Q9BTE0 207 aa21.19■□□□□ 0.98
PTPRA-208ENST00000455631 EFCAB11Q9BUY7 163 aa21.19■□□□□ 0.98
PTPRA-208ENST00000455631 PHACTR1Q9C0D0 580 aa21.19■□□□□ 0.98
PTPRA-208ENST00000455631 CHD3Q12873 2000 aaKnown RBP21.18■□□□□ 0.98
PTPRA-208ENST00000455631 SAP18O00422 153 aaKnown RBP21.18■□□□□ 0.98
PTPRA-208ENST00000455631 OR10H2O60403 315 aa21.18■□□□□ 0.98
PTPRA-208ENST00000455631 PRKRAO75569 313 aaKnown RBP21.18■□□□□ 0.98
PTPRA-208ENST00000455631 SCELO95171 688 aa21.18■□□□□ 0.98
PTPRA-208ENST00000455631 NAGLUP54802 743 aa21.18■□□□□ 0.98
PTPRA-208ENST00000455631 SLC37A1P57057 533 aa21.18■□□□□ 0.98
PTPRA-208ENST00000455631 ACKR1Q16570 336 aa21.18■□□□□ 0.98
PTPRA-208ENST00000455631 MSS51Q4VC12 460 aa21.18■□□□□ 0.98
PTPRA-208ENST00000455631 PAGE2BQ5JRK9 111 aa21.18■□□□□ 0.98
PTPRA-208ENST00000455631 IGDCC3Q8IVU1 814 aa21.18■□□□□ 0.98
PTPRA-208ENST00000455631 ST13P4Q8IZP2 240 aaPredicted RBP21.18■□□□□ 0.98
PTPRA-208ENST00000455631 GCNT2Q8N0V5 402 aa21.18■□□□□ 0.98
PTPRA-208ENST00000455631 ANKRD49Q8WVL7 239 aa21.18■□□□□ 0.98
PTPRA-208ENST00000455631 PIK3IP1Q96FE7 263 aa21.18■□□□□ 0.98
PTPRA-208ENST00000455631 CFAP36Q96G28 342 aa21.18■□□□□ 0.98
PTPRA-208ENST00000455631 VPS39Q96JC1 886 aa21.18■□□□□ 0.98
PTPRA-208ENST00000455631 TM9SF2Q99805 663 aa21.18■□□□□ 0.98
PTPRA-208ENST00000455631 TUBA1CQ9BQE3 449 aa21.18■□□□□ 0.98
PTPRA-208ENST00000455631 ANGPTL4Q9BY76 406 aa21.18■□□□□ 0.98
PTPRA-208ENST00000455631 LZTFL1Q9NQ48 299 aa21.18■□□□□ 0.98
PTPRA-208ENST00000455631 ATRQ13535 2644 aa21.17■□□□□ 0.98
PTPRA-208ENST00000455631 OR6C76A6NM76 312 aa21.17■□□□□ 0.98
PTPRA-208ENST00000455631 H0Y3Z8 333 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms