RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 SNTB2Q13425 540 aaKnown RBP11.82□□□□□ -0.52
UBE3B-204ENST00000449510 EFR3AQ14156 821 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 P2RY14Q15391 338 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 POMZP3Q6PJE2 187 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 MMP21Q8N119 569 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 KLHL36Q8N4N3 616 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 CYB561A3Q8NBI2 242 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 OR51A7Q8NH64 312 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 ADAMTS15Q8TE58 950 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 SNX33Q8WV41 574 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 PEX13Q92968 403 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 PRAP1Q96NZ9 151 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 FBXL12Q9NXK8 326 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 SLX4Q8IY92 1834 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 CKAP5Q14008 2032 aa11.82□□□□□ -0.52
UBE3B-204ENST00000449510 FEZF1A0PJY2 475 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 UBE2QL1A1L167 161 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 B4DXG7 233 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 SCAMP2O15127 329 aaKnown RBP11.81□□□□□ -0.52
UBE3B-204ENST00000449510 STC2O76061 302 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 JUPP14923 745 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 PTX3P26022 381 aaPredicted RBP11.81□□□□□ -0.52
UBE3B-204ENST00000449510 SRP9P49458 86 aaKnown RBP11.81□□□□□ -0.52
UBE3B-204ENST00000449510 FLT3LGP49771 235 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 RTP2Q5QGT7 225 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 CEACAM19Q7Z692 300 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 SLC16A10Q8TF71 515 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 KLK6Q92876 244 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 COQ10AQ96MF6 247 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 GTPBP2Q9BX10 602 aaKnown RBP11.81□□□□□ -0.52
UBE3B-204ENST00000449510 EGLN3Q9H6Z9 239 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 PDGFAP04085 211 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 ARSBP15848 533 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 TIA1P31483 386 aaKnown RBP eCLIP11.81□□□□□ -0.52
UBE3B-204ENST00000449510 SNTA1Q13424 505 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 FGL2Q14314 439 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 INSL4Q14641 139 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 ZNF630Q2M218 657 aaPredicted RBP11.81□□□□□ -0.52
UBE3B-204ENST00000449510 ARSIQ5FYB1 569 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 GDPD1Q8N9F7 314 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 OR2AP1Q8NGE2 309 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 SLC35G5Q96KT7 338 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.81□□□□□ -0.52
UBE3B-204ENST00000449510 SEC16AO15027 2179 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 CSO75390 466 aaKnown RBP11.81□□□□□ -0.52
UBE3B-204ENST00000449510 RASGRP1O95267 797 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 LCN1P31025 176 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 HOXA9P31269 272 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 WASP42768 502 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 HNMTP50135 292 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 ANXA11P50995 505 aaKnown RBP11.81□□□□□ -0.52
UBE3B-204ENST00000449510 ELAVL2Q12926 359 aaKnown RBP11.81□□□□□ -0.52
UBE3B-204ENST00000449510 FADDQ13158 208 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 LAIR2Q6ISS4 152 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 C6orf120Q7Z4R8 191 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 RAB42Q8N4Z0 105 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 RAET1EQ8TD07 263 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 NEIL2Q969S2 332 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 FAM46AQ96IP4 442 aaKnown RBP11.81□□□□□ -0.52
UBE3B-204ENST00000449510 OR2A14Q96R47 310 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 GABRQQ9UN88 632 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 POLHQ9Y253 713 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 PCDHGB2Q9Y5G2 931 aa11.81□□□□□ -0.52
UBE3B-204ENST00000449510 KLKB1P03952 638 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 RHCEP18577 417 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 KIR2DL3P43628 341 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 SLC27A4Q6P1M0 643 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 FRRS1Q6ZNA5 592 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 ZNF467Q7Z7K2 595 aaPredicted RBP11.8□□□□□ -0.52
UBE3B-204ENST00000449510 SIMC1Q8NDZ2 872 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 C17orf62Q9BQA9 187 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.8□□□□□ -0.52
UBE3B-204ENST00000449510 PAK6Q9NQU5 681 aaPredicted RBP11.8□□□□□ -0.52
UBE3B-204ENST00000449510 MRPL17Q9NRX2 175 aaKnown RBP11.8□□□□□ -0.52
UBE3B-204ENST00000449510 MLXQ9UH92 298 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 MED16Q9Y2X0 877 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 MAB21L2Q9Y586 359 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 STRCP1A6NGW2 1772 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 CHST10O43529 356 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 SRCP12931 536 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 OSMP13725 252 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 JUNDP17535 347 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 SOX2P48431 317 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 PPP3R1P63098 170 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 GALK2Q01415 458 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 ID2Q02363 134 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 CDC20Q12834 499 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 FAM110CQ1W6H9 321 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 TPRG1Q6ZUI0 275 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 SRFBP1Q8NEF9 429 aaKnown RBP11.8□□□□□ -0.52
UBE3B-204ENST00000449510 PIGXQ8TBF5 258 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 RFKQ969G6 155 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 C1QTNF6Q9BXI9 259 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 GON7Q9BXV9 100 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 ARHGAP39Q9C0H5 1083 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 KCNN2Q9H2S1 579 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 ADAP2Q9NPF8 381 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 GLTPQ9NZD2 209 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 PCM1Q15154 2024 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 A0A1W2PRU2 124 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms