RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 ID2Q02363 134 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 TLE2Q04725 743 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 SNTA1Q13424 505 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 SPRED3Q2MJR0 410 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 SLC22A10Q63ZE4 541 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 ZNF776Q68DI1 518 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-204ENST00000448183 GDPGP1Q6ZNW5 385 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 VWA5B2Q8N398 1253 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 CELF5Q8N6W0 485 aaKnown RBP7.45□□□□□ -1.22
NEDD9-204ENST00000448183 NUP43Q8NFH3 380 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 OR4C15Q8NGM1 316 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 OR10T2Q8NGX3 314 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 CD99L2Q8TCZ2 262 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 SCAMP4Q969E2 229 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 TMIGD2Q96BF3 282 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 SHISA4Q96DD7 197 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 L3HYPDHQ96EM0 354 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 SCLYQ96I15 445 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 HS6ST2Q96MM7 605 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 COG8Q96MW5 612 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 URM1Q9BTM9 101 aaKnown RBP7.45□□□□□ -1.22
NEDD9-204ENST00000448183 NPLQ9BXD5 320 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-204ENST00000448183 FBXL12Q9NXK8 326 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 CLEC4EQ9ULY5 219 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 URB1O60287 2271 aaKnown RBP7.45□□□□□ -1.22
NEDD9-204ENST00000448183 C9J4A7 227 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 TSPAN6O43657 245 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 MAFKO60675 156 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 MRPS14O60783 128 aaKnown RBP7.45□□□□□ -1.22
NEDD9-204ENST00000448183 SOX30O94993 753 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 ASGR2P07307 311 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 UCHL1P09936 223 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 DHRS4L1P0CG22 281 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 T-ENOLP0DO92 83 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 CAPN3P20807 821 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 AK4P27144 223 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-204ENST00000448183 ADH6P28332 368 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 UQCRC1P31930 480 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 SHMT2P34897 504 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 PGGT1BP53609 377 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 SCAPQ12770 1279 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 DOC2AQ14183 400 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 PROX2Q3B8N5 592 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 ITPRIPL2Q3MIP1 535 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 UGT3A2Q3SY77 523 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 CHRFAM7AQ494W8 412 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 ANKRD54Q6NXT1 300 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 TAS1R3Q7RTX0 852 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 FTMTQ8N4E7 242 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 DTX3Q8N9I9 347 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 JPH3Q8WXH2 748 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-204ENST00000448183 GLYATL1Q969I3 302 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 SH3YL1Q96HL8 342 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-204ENST00000448183 ZNF778Q96MU6 729 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 PFDN5Q99471 154 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 TAS2R8Q9NYW2 309 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 PRODH2Q9UF12 536 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 EDARQ9UNE0 448 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 PCDHGA7Q9Y5G6 932 aa7.45□□□□□ -1.22
NEDD9-204ENST00000448183 GXYLT2A0PJZ3 443 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 GLTPD2A6NH11 291 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 CSTAP01040 98 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 RETP07949 1114 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 AGXTP21549 392 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 CBLP22681 906 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 TUBG1P23258 451 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 ACRV1P26436 265 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 HNF1BP35680 557 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 DPP6P42658 865 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 PSAPL1Q6NUJ1 521 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 MTFR2Q6P444 385 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 ZNF283Q8N7M2 679 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 ZFP41Q8N8Y5 198 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 PROKR1Q8TCW9 393 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 MAPK15Q8TD08 544 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 SCGB1C1Q8TD33 95 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 DEDD2Q8WXF8 326 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 AUTS2Q8WXX7 1259 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 DHDHQ9UQ10 334 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 WNT6Q9Y6F9 365 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 SPEF2Q9C093 1822 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 MITFO75030 526 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-204ENST00000448183 PAK4O96013 591 aaPredicted RBP7.44□□□□□ -1.22
NEDD9-204ENST00000448183 F2P00734 622 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 HRH2P25021 359 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 GKP32189 559 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 GMPRP36959 345 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 DCTP40126 519 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 ETV4P43268 484 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 FGFBP1Q14512 234 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 OR4D1Q15615 310 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 CDNFQ49AH0 187 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 ARHGAP40Q5TG30 622 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 FIP1L1Q6UN15 594 aaKnown RBP7.44□□□□□ -1.22
NEDD9-204ENST00000448183 ISCA2Q86U28 154 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 TMEM156Q8N614 296 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 SLC5A8Q8N695 610 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 PAPD5Q8NDF8 572 aaKnown RBP7.44□□□□□ -1.22
NEDD9-204ENST00000448183 OR52P1PQ8NH57 321 aa7.44□□□□□ -1.22
NEDD9-204ENST00000448183 ELP5Q8TE02 316 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms