RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 SFXN3Q9BWM7 321 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 LIN28AQ9H9Z2 209 aaKnown RBP4.42□□□□□ -1.7
SDCBP-205ENST00000447267 IL1RL2Q9HB29 575 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 ARNT2Q9HBZ2 717 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 C14orf105Q9NVL8 296 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 C14orf119Q9NWQ9 140 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 STAP1Q9ULZ2 295 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 ICKQ9UPZ9 632 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 CNTN6Q9UQ52 1028 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 TRAF3IP3Q9Y228 551 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 PCDHGB3Q9Y5G1 929 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 U3KQK5 164 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 CSMD3Q7Z407 3707 aa4.42□□□□□ -1.7
SDCBP-205ENST00000447267 LOC105371242A0A075B767 164 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 C1orf232A0A0U1RR37 186 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 A0A1W2PQ67 120 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 PRKD3O94806 890 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 BCL10O95999 233 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 CHRM5P08912 532 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-205ENST00000447267 SLC35G4P0C7Q5 338 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 PRSS56P0CW18 603 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 TPBGLP0DKB5 382 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 RAP2AP10114 183 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 EZRP15311 586 aaKnown RBP4.41□□□□□ -1.7
SDCBP-205ENST00000447267 ZNF23P17027 643 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 CNR1P21554 472 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 NR2F2P24468 414 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 PEBP1P30086 187 aaKnown RBP4.41□□□□□ -1.7
SDCBP-205ENST00000447267 SLC26A3P40879 764 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 MTNR1BP49286 362 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 SLC26A5P58743 744 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 CBX1P83916 185 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 SCGB2A2Q13296 93 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 GTF2H3Q13889 308 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 ZNF672Q499Z4 452 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-205ENST00000447267 ZNF529Q6P280 563 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 IL20RBQ6UXL0 311 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 DET1Q7L5Y6 550 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 RCOR2Q8IZ40 523 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 UMODL1-AS1Q8N2C9 162 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 RASGEF1CQ8N431 466 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 C2orf73Q8N5S3 287 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-205ENST00000447267 CCDC185Q8N715 623 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 BOLLQ8N9W6 283 aaKnown RBP4.41□□□□□ -1.7
SDCBP-205ENST00000447267 KBTBD8Q8NFY9 601 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 NEIL3Q8TAT5 605 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 FATE1Q969F0 183 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 ZNF653Q96CK0 615 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 FAF2Q96CS3 445 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 NTNG2Q96CW9 530 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 NUDCD1Q96RS6 583 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 ARPC5LQ9BPX5 153 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 NUP85Q9BW27 656 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 RAB11FIP5Q9BXF6 653 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 BLZF1Q9H2G9 400 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 PIGMQ9H3S5 423 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 TFB2MQ9H5Q4 396 aaKnown RBP4.41□□□□□ -1.7
SDCBP-205ENST00000447267 ADAP2Q9NPF8 381 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 MKKSQ9NPJ1 570 aaPredicted RBP4.41□□□□□ -1.7
SDCBP-205ENST00000447267 PKD2L2Q9NZM6 624 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 FAM30AQ9NZY2 134 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 ZDHHC2Q9UIJ5 367 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 MID2Q9UJV3 735 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 CAPN11Q9UMQ6 739 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 CHKBQ9Y259 395 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 CLIC4Q9Y696 253 aa4.41□□□□□ -1.7
SDCBP-205ENST00000447267 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 A0A0A6YYC8 382 aaPredicted RBP4.4□□□□□ -1.71
SDCBP-205ENST00000447267 LRRC3CA6NJW4 275 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 I3L1I5 382 aaPredicted RBP4.4□□□□□ -1.71
SDCBP-205ENST00000447267 DFFAO00273 331 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 FCHO1O14526 889 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 DHHO43323 396 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 RAMP1O60894 148 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 CTSVO60911 334 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 KCNJ13O60928 360 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 TNFSF13O75888 250 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 SLC4A1P02730 911 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 SKILP12757 684 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 LYL1P12980 280 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 OSMP13725 252 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 TNNT1P13805 278 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 PRTN3P24158 256 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 LMO1P25800 156 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 IL1R2P27930 398 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 PSMC2P35998 433 aaKnown RBP4.4□□□□□ -1.71
SDCBP-205ENST00000447267 NOMO3P69849 1222 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 GABPB1Q06547 395 aaPredicted RBP4.4□□□□□ -1.71
SDCBP-205ENST00000447267 CRYZQ08257 329 aaKnown RBP4.4□□□□□ -1.71
SDCBP-205ENST00000447267 AP1B1Q10567 949 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 MALLQ13021 153 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 CUL4BQ13620 913 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 PIGHQ14442 188 aaPredicted RBP4.4□□□□□ -1.71
SDCBP-205ENST00000447267 NOMO1Q15155 1222 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 CDO1Q16878 200 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 TCTE1Q5JU00 501 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 DCST1Q5T197 706 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 ERMARDQ5T6L9 678 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 VWA1Q6PCB0 445 aa4.4□□□□□ -1.71
SDCBP-205ENST00000447267 Q6ZNX1 250 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms