RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 PEX6Q13608 980 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 FLOT2Q14254 428 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 FASTKQ14296 549 aaKnown RBP3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 IRF3Q14653 427 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 GSTA3Q16772 222 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 UGT3A2Q3SY77 523 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 MMEL1Q495T6 779 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 GXYLT1Q4G148 440 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 AGKQ53H12 422 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 SETMARQ53H47 684 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZRANB3Q5FWF4 1079 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 PIGGQ5H8A4 983 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 TCHHL1Q5QJ38 904 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 PPM1LQ5SGD2 360 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 PLEKHS1Q5SXH7 462 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 TMEM198Q66K66 360 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 CAPRIN2Q6IMN6 1127 aaKnown RBP3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 UGT3A1Q6NUS8 523 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 IRGCQ6NXR0 463 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 IZUMO2Q6UXV1 221 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 TAS2R42Q7RTR8 314 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 EFL1Q7Z2Z2 1120 aaKnown RBP3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 ANKRD33Q7Z3H0 272 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 DHDDSQ86SQ9 333 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 ITIH5Q86UX2 942 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 KBTBD6Q86V97 674 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 CAMK1DQ8IU85 385 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 ADGRF3Q8IZF5 1079 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 SLC39A11Q8N1S5 342 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 FBXO39Q8N4B4 442 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 FRMD1Q8N878 549 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 CATSPER1Q8NEC5 780 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 LPCAT1Q8NF37 534 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 OR52K2Q8NGK3 314 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 B4GALNT2Q8NHY0 566 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 GDPD5Q8WTR4 605 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 PYDC1Q8WXC3 89 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 NCSTNQ92542 709 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 LPGAT1Q92604 370 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 KCNJ9Q92806 393 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 EXT2Q93063 718 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 WBP2Q969T9 261 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 PTERQ96BW5 349 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 RCN3Q96D15 328 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 NSMCE3Q96MG7 304 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 PRICKLE1Q96MT3 831 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 DEFB118Q96PH6 123 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 ATOH8Q96SQ7 321 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZNF184Q99676 751 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 NPAS2Q99743 824 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 ECSITQ9BQ95 431 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 FEM1AQ9BSK4 669 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 ERVK-6Q9BXR3 956 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 HDHD5Q9BXW7 423 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 KLHL4Q9C0H6 718 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 DERL2Q9GZP9 239 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 SLCO5A1Q9H2Y9 848 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 VCXQ9H320 206 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 WDR41Q9HAD4 459 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 MID1IP1Q9NPA3 183 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 PFDN4Q9NQP4 134 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 TAS2R13Q9NYV9 303 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 SPG21Q9NZD8 308 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 LHX3Q9UBR4 397 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 HSPB7Q9UBY9 170 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 TRMT6Q9UJA5 497 aaKnown RBP3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 PSMD13Q9UNM6 376 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 ZNF510Q9Y2H8 683 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 ADAM18Q9Y3Q7 739 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 YIPF1Q9Y548 306 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 LRP12Q9Y561 859 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 TRIM17Q9Y577 477 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 TTC3P53804 2025 aa3.29□□□□□ -1.88
HMGB3P11-201ENST00000440127 FRMPD3Q5JV73 1810 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 PATJQ8NI35 1801 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 DOCK3Q8IZD9 2030 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 A0A0G2JK05 382 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 PABPN1LA6NDY0 278 aaKnown RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 A8MZ25 164 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 SUPT3HB4E1H0 165 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 H3BMM5 538 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 UBXN8O00124 270 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 CDC7O00311 574 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 CASQ2O14958 399 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 AZIN1O14977 448 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 BCAT2O15382 392 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 ADAM20O43506 726 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 KLK8O60259 260 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 SNAP91O60641 907 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 KERAO60938 352 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 ATG13O75143 517 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 SUPT3HO75486 399 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 CRCPO75575 148 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 BCAS2O75934 225 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 TMCC1O94876 653 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 CDK14O94921 469 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 PGLSO95336 258 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 STAMBPO95630 424 aa3.28□□□□□ -1.88
HMGB3P11-201ENST00000440127 OLFM2O95897 454 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms