RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 C5orf30Q96GV9 206 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 PRAM1Q96QH2 718 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 ERGIC2Q96RQ1 377 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 S1PR3Q99500 378 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 TEX13BQ9BXU2 312 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 IQCGQ9H095 443 aaKnown RBP3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 HEXA-AS1Q9H8Q6 139 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 WDR41Q9HAD4 459 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 IL1RAPQ9NPH3 570 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 PNPLA3Q9NST1 481 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 AIPL1Q9NZN9 384 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 COX16Q9P0S2 106 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 APPL1Q9UKG1 709 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 KLK13Q9UKR3 277 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 EXOC7Q9UPT5 735 aa3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 DDX49Q9Y6V7 483 aaKnown RBP3.1□□□□□ -1.91
LSM1P1-201ENST00000438629 TDRD15B5MCY1 1934 aaKnown RBP3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 A0A0A6YYC8 382 aaPredicted RBP3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 SLC9B1P1A6NJY1 282 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 A8MU76 341 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 H0YIG0 161 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 I3L1I5 382 aaPredicted RBP3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 RASGRF2O14827 1237 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 OGTO15294 1046 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 KIAA0513O60268 411 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 KLHL41O60662 606 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 AKAP3O75969 853 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 SNX4O95219 450 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 OR6A2O95222 327 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 TBX6O95947 436 aaPredicted RBP3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 IGHV3-13P01766 116 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 MMP10P09238 476 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 CT45A8P0DMV1 189 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 CT45A9P0DMV2 189 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 CD1DP15813 335 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 CCNA2P20248 432 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 HSPA1LP34931 641 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 PTGER3P43115 390 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 SLC1A6P48664 564 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 ATXN3P54252 364 aaPredicted RBP3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 CDKL1Q00532 357 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 STX1AQ16623 288 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 KNOP1Q1ED39 458 aaKnown RBP3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 SLC39A12Q504Y0 691 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 CEP55Q53EZ4 464 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 CT45A2Q5DJT8 189 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 DDI2Q5TDH0 399 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 PRAMEF8Q5VWM4 474 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 AP1ARQ63HQ0 302 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 CAPN13Q6MZZ7 669 aaPredicted RBP3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 ZNF343Q6P1L6 599 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 RBM43Q6ZSC3 357 aaKnown RBP3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 TMUB2Q71RG4 321 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 ABHD12Q8N2K0 398 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 GVQW1Q8N7I0 195 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 BANPQ8N9N5 519 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 CCDC197Q8NCU1 140 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 GMCL1P1Q8NEA9 526 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 OR2L2Q8NH16 312 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 GPR148Q8TDV2 347 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 WBP1Q96G27 269 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 TNFRSF13CQ96RJ3 184 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 KCNK16Q96T55 309 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 DDX50Q9BQ39 737 aaKnown RBP3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 FAM213AQ9BRX8 229 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 RBM24Q9BX46 236 aaKnown RBP3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 TEX13AQ9BXU3 409 aaPredicted RBP3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 OSBPL8Q9BZF1 889 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 OCR1Q9BZK8 76 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 HSD3B7Q9H2F3 369 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 JPT2Q9H910 190 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 PLEKHA3Q9HB20 300 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 TRPV5Q9NQA5 729 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 QPCTLQ9NXS2 382 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 LAMP5Q9UJQ1 280 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 RARRES3Q9UL19 164 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 CCPG1Q9ULG6 757 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 HPCAL4Q9UM19 191 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 FOXA2Q9Y261 457 aaPredicted RBP3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 NOSIPQ9Y314 301 aaKnown RBP3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 SH3GLB1Q9Y371 365 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 ATP8B3O60423 1300 aa3.09□□□□□ -1.91
LSM1P1-201ENST00000438629 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.09□□□□□ -1.92
LSM1P1-201ENST00000438629 COL5A2P05997 1499 aaPredicted RBP3.09□□□□□ -1.92
LSM1P1-201ENST00000438629 TRGV8A0A0C4DH27 118 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 A0A1W2PPR1 153 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 SMIM30A4D0T7 59 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 OR5H15A6NDH6 313 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 IGLON5A6NGN9 336 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 SLC15A5A6NIM6 579 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 GPR89AB7ZAQ6 455 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 ANHXE9PGG2 379 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 H0YC42 278 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 K7EPI3 171 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 M0QX08 132 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 FBP2O00757 339 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 CHEK1O14757 476 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 PSMD3O43242 534 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 SSX5O60225 188 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms