RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 ATP6V1FQ16864 119 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 SLC35G1Q2M3R5 365 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 CBWD6Q4V339 395 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 ZNF766Q5HY98 468 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 CBWD3Q5JTY5 395 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 CBWD5Q5RIA9 395 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 LRP10Q7Z4F1 713 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 RHOT1Q8IXI2 618 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 FAM83FQ8NEG4 500 aaPredicted RBP5.12□□□□□ -1.59
PTPN4-203ENST00000430976 OR4K14Q8NGD5 310 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 OR56A3Q8NH54 315 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 DNAJB14Q8TBM8 379 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 MITD1Q8WV92 249 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 DCAKDQ8WVC6 231 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 PERPQ96FX8 193 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 ZNF385AQ96PM9 386 aaKnown RBP5.12□□□□□ -1.59
PTPN4-203ENST00000430976 PARK7Q99497 189 aaKnown RBP5.12□□□□□ -1.59
PTPN4-203ENST00000430976 SLC35A5Q9BS91 424 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 FUZQ9BT04 418 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 TMEM208Q9BTX3 173 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 RAB11FIP5Q9BXF6 653 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 TMEM185BQ9H7F4 350 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 CXorf21Q9HAI6 301 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 NDRG3Q9UGV2 375 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 PACSIN3Q9UKS6 424 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 LIPT1Q9Y234 373 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 ADAM18Q9Y3Q7 739 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 TEX264Q9Y6I9 313 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 CAPN6Q9Y6Q1 641 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 YTHDC2Q9H6S0 1430 aaKnown RBP5.12□□□□□ -1.59
PTPN4-203ENST00000430976 ADAMTSL3P82987 1691 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 SIGLEC16A6NMB1 481 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 DISC1C4P0D8 188 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 PDE6DO43924 150 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 HCN1O60741 890 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 GADD45GO95257 159 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 AMHP03971 560 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 ITGB2P05107 769 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 CSF3P09919 207 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 ITGAMP11215 1152 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 OMGP23515 440 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 ARL4DP49703 201 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 MNX1P50219 401 aaPredicted RBP5.12□□□□□ -1.59
PTPN4-203ENST00000430976 PRKXP51817 358 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 NDST2P52849 883 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 NUDT6P53370 316 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 UCP2P55851 309 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 BIDP55957 195 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 SESN2P58004 480 aaPredicted RBP5.12□□□□□ -1.59
PTPN4-203ENST00000430976 NAAAQ02083 359 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 FGFBP1Q14512 234 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 GNMTQ14749 295 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 VAMP3Q15836 100 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 GALNTL6Q49A17 601 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 SAMD13Q5VXD3 122 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 ANKRD54Q6NXT1 300 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 FAM171BQ6P995 826 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 RAB43Q86YS6 212 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 FAM219AQ8IW50 185 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 TMEM123Q8N131 208 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 LIX1Q8N485 282 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 NANOGP1Q8N7R0 232 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 S100ZQ8WXG8 99 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 SMIM12Q96EX1 92 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 PGAM5Q96HS1 289 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 TXNDC15Q96J42 360 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 SFXN2Q96NB2 322 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 TSNAXQ99598 290 aaKnown RBP5.12□□□□□ -1.59
PTPN4-203ENST00000430976 OCSTAMPQ9BR26 566 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 LRFN3Q9BTN0 628 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 SGPP1Q9BX95 441 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 DERL2Q9GZP9 239 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 MCOLN1Q9GZU1 580 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 PDZD7Q9H5P4 517 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 MED20Q9H944 212 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 ASF1BQ9NVP2 202 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 TUBE1Q9UJT0 475 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 FBXL2Q9UKC9 423 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 ST3GAL5Q9UNP4 418 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 PCDHB1Q9Y5F3 818 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 PTPRGP23470 1445 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 ZMYM2Q9UBW7 1377 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 TRAV26-1A0A087WT03 109 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 OR6C68A6NDL8 312 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 SPINT1O43278 529 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 CLEC3AO75596 197 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 MT-CO2P00403 227 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 GYPCP04921 128 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 LPLP06858 475 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 EBLN1P0CF75 366 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 DCKP27707 260 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 IL1R2P27930 398 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 ERP29P30040 261 aaKnown RBP5.12□□□□□ -1.59
PTPN4-203ENST00000430976 QARSP47897 775 aaKnown RBP5.12□□□□□ -1.59
PTPN4-203ENST00000430976 SOX8P57073 446 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 LSM3P62310 102 aaKnown RBP5.12□□□□□ -1.59
PTPN4-203ENST00000430976 FABP9Q0Z7S8 132 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 P2RY14Q15391 338 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 RNF165Q6ZSG1 346 aa5.12□□□□□ -1.59
PTPN4-203ENST00000430976 DHDDSQ86SQ9 333 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms