RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 TMEM240Q5SV17 173 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 TPRG1LQ5T0D9 272 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 SYT6Q5T7P8 510 aaPredicted RBP4.13□□□□□ -1.75
SMC6-203ENST00000402989 LIPKQ5VXJ0 399 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 RRM2BQ7LG56 351 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 COMTD1Q86VU5 262 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 NUDT13Q86X67 352 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 ZNF761Q86XN6 746 aaPredicted RBP4.13□□□□□ -1.75
SMC6-203ENST00000402989 RP1L1Q8IWN7 2480 aaPredicted RBP4.13□□□□□ -1.75
SMC6-203ENST00000402989 SHISA5Q8N114 240 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 DEPDC4Q8N2C3 294 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 ZNF513Q8N8E2 541 aaPredicted RBP4.13□□□□□ -1.75
SMC6-203ENST00000402989 ZNF557Q8N988 423 aaPredicted RBP4.13□□□□□ -1.75
SMC6-203ENST00000402989 DTX3Q8N9I9 347 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 GPR32P1Q8NGA4 272 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 OR6Q1Q8NGQ2 317 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 OR9Q1Q8NGQ5 310 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 DYNC2LI1Q8TCX1 351 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 WFIKKN2Q8TEU8 576 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 SMPDL3AQ92484 453 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 UBE2E3Q969T4 207 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 C11orf24Q96F05 449 aaPredicted RBP4.13□□□□□ -1.75
SMC6-203ENST00000402989 TEFMQ96QE5 360 aaKnown RBP4.13□□□□□ -1.75
SMC6-203ENST00000402989 MGLLQ99685 303 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 ZNF106Q9H2Y7 1883 aaKnown RBP4.13□□□□□ -1.75
SMC6-203ENST00000402989 ABCB9Q9NP78 766 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 CD93Q9NPY3 652 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 CHCHD3Q9NX63 227 aaKnown RBP4.13□□□□□ -1.75
SMC6-203ENST00000402989 FBXL12Q9NXK8 326 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 CNIH4Q9P003 139 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 PADI2Q9Y2J8 665 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 YARS2Q9Y2Z4 477 aaKnown RBP4.13□□□□□ -1.75
SMC6-203ENST00000402989 STON1Q9Y6Q2 735 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 LTBP2Q14767 1821 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 ARHGEF17Q96PE2 2063 aaPredicted RBP4.13□□□□□ -1.75
SMC6-203ENST00000402989 NPIPA5A0A0B4J1W7 369 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 CLDN24A6NM45 220 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.13□□□□□ -1.75
SMC6-203ENST00000402989 NPIPA7E9PJI5 369 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 HAT1O14929 419 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 SSX4O60224 188 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 ADAM23O75077 832 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 SULT1C4O75897 302 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 PAPLNO95428 1278 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 SEMG1P04279 462 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 RPLP0P05388 317 aaKnown RBP4.13□□□□□ -1.75
SMC6-203ENST00000402989 NPIPA8P0DM63 369 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 SPNP16150 400 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 JUNDP17535 347 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 DDCP20711 480 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 PPP2R1BP30154 601 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 NTSP30990 170 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 ATP6V1E1P36543 226 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 OPRD1P41143 372 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 XCR1P46094 333 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 SLC16A1P53985 500 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 BTN3A2P78410 334 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 DOC2BQ14184 412 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 PDGFRLQ15198 375 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 CST6Q15828 149 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 ZNF542PQ5EBM4 170 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 KIAA1211LQ6NV74 962 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 RNF165Q6ZSG1 346 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 LAS2Q8IYD9 372 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 NRSN1Q8IZ57 195 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 CYP4Z2PQ8N1L4 340 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 CPA6Q8N4T0 437 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 CAMKK1Q8N5S9 505 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 RHOXF1Q8NHV9 184 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 CHPT1Q8WUD6 406 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 IPCEF1Q8WWN9 437 aaPredicted RBP4.13□□□□□ -1.75
SMC6-203ENST00000402989 SMARCD2Q92925 531 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 RGMAQ96B86 450 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 FCRL1Q96LA6 429 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 TBX5Q99593 518 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 TREX2Q9BQ50 279 aaPredicted RBP4.13□□□□□ -1.75
SMC6-203ENST00000402989 MS4A8Q9BY19 250 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 RBCK1Q9BYM8 510 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 TTTY10Q9BZA0 68 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 UCK2Q9BZX2 261 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 EGLN3Q9H6Z9 239 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 MRPS30Q9NP92 439 aaKnown RBP4.13□□□□□ -1.75
SMC6-203ENST00000402989 AKIP1Q9NQ31 210 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 MKLN1Q9UL63 735 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 IFT52Q9Y366 437 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 ATG4BQ9Y4P1 393 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 MDC1Q14676 2089 aaKnown RBP4.13□□□□□ -1.75
SMC6-203ENST00000402989 SEC16AO15027 2179 aa4.13□□□□□ -1.75
SMC6-203ENST00000402989 A0A1W2PQU0 124 aa4.12□□□□□ -1.75
SMC6-203ENST00000402989 GSAPA4D1B5 854 aa4.12□□□□□ -1.75
SMC6-203ENST00000402989 FOXE1O00358 373 aaPredicted RBP4.12□□□□□ -1.75
SMC6-203ENST00000402989 BTN3A3O00478 584 aa4.12□□□□□ -1.75
SMC6-203ENST00000402989 HMGN4O00479 90 aa4.12□□□□□ -1.75
SMC6-203ENST00000402989 MYL12BO14950 172 aa4.12□□□□□ -1.75
SMC6-203ENST00000402989 KIAA0355O15063 1070 aa4.12□□□□□ -1.75
SMC6-203ENST00000402989 SNX4O95219 450 aa4.12□□□□□ -1.75
SMC6-203ENST00000402989 FGF19O95750 216 aa4.12□□□□□ -1.75
SMC6-203ENST00000402989 TBX6O95947 436 aaPredicted RBP4.12□□□□□ -1.75
SMC6-203ENST00000402989 HMGN2P05204 90 aaKnown RBP4.12□□□□□ -1.75
SMC6-203ENST00000402989 IL1RNP18510 177 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms