RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 H0YIV9 168 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 MRPS14O60783 128 aaKnown RBP15.35■□□□□ 0.05
PCDH1-203ENST00000394536 SRPRAP08240 638 aaKnown RBP15.35■□□□□ 0.05
PCDH1-203ENST00000394536 CD8BP10966 210 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 ZNF8P17098 575 aaPredicted RBP15.35■□□□□ 0.05
PCDH1-203ENST00000394536 MAT2AP31153 395 aaKnown RBP15.35■□□□□ 0.05
PCDH1-203ENST00000394536 HNRNPFP52597 415 aaKnown RBP15.35■□□□□ 0.05
PCDH1-203ENST00000394536 WNT3P56703 355 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 ZNF791Q3KP31 576 aaPredicted RBP15.35■□□□□ 0.05
PCDH1-203ENST00000394536 SNAP47Q5SQN1 464 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 SLCO4C1Q6ZQN7 724 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 CCDC71Q8IV32 467 aaPredicted RBP15.35■□□□□ 0.05
PCDH1-203ENST00000394536 ZNF557Q8N988 423 aaPredicted RBP15.35■□□□□ 0.05
PCDH1-203ENST00000394536 TMEM145Q8NBT3 493 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 ATP6V1C2Q8NEY4 427 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 SLC38A5Q8WUX1 472 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 RGMAQ96B86 450 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 EFHD2Q96C19 240 aaPredicted RBP15.35■□□□□ 0.05
PCDH1-203ENST00000394536 C7orf34Q96L11 122 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 BRF2Q9HAW0 419 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 ZC4H2Q9NQZ6 224 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 ZNF226Q9NYT6 803 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 SLC6A14Q9UN76 642 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 PCDHGB1Q9Y5G3 927 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 RGPD3A6NKT7 1758 aaPredicted RBP15.35■□□□□ 0.05
PCDH1-203ENST00000394536 RGPD4Q7Z3J3 1758 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 SH3D21A4FU49 640 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 ADAP00813 363 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 IL7P13232 177 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 PPM1AP35813 382 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 PRKCDQ05655 676 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 NOGQ13253 232 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 B3GLCTQ6Y288 498 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 TIGD4Q8IY51 512 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 OR51G2Q8NGK0 314 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 PIGXQ8TBF5 258 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 ECHDC3Q96DC8 303 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 C3orf14Q9HBI5 128 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 ACER3Q9NUN7 267 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 KCNK6Q9Y257 313 aa15.35■□□□□ 0.05
PCDH1-203ENST00000394536 CCDC88CQ9P219 2028 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 TRBV5-3A0A0A0MS03 114 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 TRBV5-4A0A0C4DH59 114 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 C2orf92A0A1B0GVN3 265 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 GPX5O75715 221 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 RAB36O95755 333 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 GRK5P34947 590 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 MAPK9P45984 424 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 SLC9A5Q14940 896 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 LRIT3Q3SXY7 679 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 ZMAT1Q5H9K5 638 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 OR52E4Q8NGH9 312 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 OR4K3Q96R72 315 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 NEUROD4Q9HD90 331 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 GFYI3L273 518 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 SLC9A3R1O14745 358 aaPredicted RBP15.34■□□□□ 0.05
PCDH1-203ENST00000394536 SSNA1O43805 119 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 GUCY1B2O75343 617 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 TIMP2P16035 220 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 RACK1P63244 317 aaKnown RBP15.34■□□□□ 0.05
PCDH1-203ENST00000394536 GNA13Q14344 377 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 FAHD1Q6P587 224 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 NEIL3Q8TAT5 605 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 ZCCHC10Q8TBK6 192 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 OR5P2Q8WZ92 322 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 COQ8BQ96D53 544 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 OR2B2Q9GZK3 357 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 QRSL1Q9H0R6 528 aaKnown RBP15.34■□□□□ 0.05
PCDH1-203ENST00000394536 CXorf36Q9H7Y0 433 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 RANGRFQ9HD47 186 aaPredicted RBP15.34■□□□□ 0.05
PCDH1-203ENST00000394536 CKAP5Q14008 2032 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 CEP290O15078 2479 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 A0A1W2PPK0 400 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 FAM47E-STBD1D6RA91 191 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 BTN3A3O00478 584 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 GNB5O14775 395 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 PGRMC2O15173 223 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 FGF18O76093 207 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 KCNK2O95069 426 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 IL1RNP18510 177 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 PSMB5P28074 263 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 CTNNB1P35222 781 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 ATAD3CQ5T2N8 411 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 WDR53Q7Z5U6 358 aaPredicted RBP15.34■□□□□ 0.05
PCDH1-203ENST00000394536 N6AMT1Q9Y5N5 214 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 SNX11Q9Y5W9 270 aa15.34■□□□□ 0.05
PCDH1-203ENST00000394536 TRAV6A0A075B6T7 132 aa15.33■□□□□ 0.05
PCDH1-203ENST00000394536 FAAHO00519 579 aa15.33■□□□□ 0.05
PCDH1-203ENST00000394536 PLD2O14939 933 aa15.33■□□□□ 0.05
PCDH1-203ENST00000394536 KMOO15229 486 aa15.33■□□□□ 0.05
PCDH1-203ENST00000394536 ORC5O43913 435 aa15.33■□□□□ 0.05
PCDH1-203ENST00000394536 RAB14P61106 215 aa15.33■□□□□ 0.05
PCDH1-203ENST00000394536 PCDH1Q08174 1060 aa15.33■□□□□ 0.05
PCDH1-203ENST00000394536 E2F2Q14209 437 aa15.33■□□□□ 0.05
PCDH1-203ENST00000394536 GPR68Q15743 365 aa15.33■□□□□ 0.05
PCDH1-203ENST00000394536 PAMR1Q6UXH9 720 aa15.33■□□□□ 0.05
PCDH1-203ENST00000394536 GRASPQ7Z6J2 395 aaPredicted RBP15.33■□□□□ 0.05
PCDH1-203ENST00000394536 TCEAL8Q8IYN2 117 aa15.33■□□□□ 0.05
PCDH1-203ENST00000394536 JPH3Q8WXH2 748 aaPredicted RBP15.33■□□□□ 0.05
PCDH1-203ENST00000394536 SMG7Q92540 1137 aaKnown RBP15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms