RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 ZRANB2O95218 330 aaKnown RBP eCLIP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 SLU7O95391 586 aaKnown RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 MT-CO1P00395 513 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 CD8AP01732 235 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 TFP02787 698 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 HEXAP06865 529 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 ANXA6P08133 673 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 CTSGP08311 255 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 FCGR3AP08637 254 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 HOXB5P09067 269 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 NBPF7P0C2Y1 421 aaPredicted RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 ACSM4P0C7M7 580 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 OR9G9P0C7N8 305 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 INAFM2P0DMQ5 153 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 CT45A10P0DMU9 189 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 GZMBP10144 247 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 NR2F1P10589 423 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF35P13682 527 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 ACP5P13686 325 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 TNNT1P13805 278 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 HSD17B1P14061 328 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 CHN1P15882 459 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF18P17022 549 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 GJA1P17302 382 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 IGHV1-2P23083 117 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 POU1F1P28069 291 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 ERCC5P28715 1186 aaPredicted RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 CCR7P32248 378 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 HNF1BP35680 557 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 PPM1AP35813 382 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 GP5P40197 560 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 MNDAP41218 407 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 GARSP41250 739 aaKnown RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 MATR3P43243 847 aaKnown RBP eCLIP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 MAGEA8P43361 318 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 GABRB2P47870 512 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 UBE2AP49459 152 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 PPM1FP49593 454 aaPredicted RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 MCM2P49736 904 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 TKTL1P51854 596 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 ARHGDIAP52565 204 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 PEX3P56589 373 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 KLF3P57682 345 aaPredicted RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 OC90Q02509 493 aaPredicted RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 TLE2Q04725 743 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 LIPEQ05469 1076 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 GTF3C1Q12789 2109 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 CDC16Q13042 620 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 UBE2V1Q13404 147 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 SQSTM1Q13501 440 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 SERINC3Q13530 473 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC12A1Q13621 1099 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 PTK6Q13882 451 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF273Q14593 569 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 PPP2R5BQ15173 497 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 GUSBP1Q15486 140 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 TAF11Q15544 211 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 NSDHLQ15738 373 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 PFKFB4Q16877 469 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 TPRXLQ17RH7 258 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 HKDC1Q2TB90 917 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 CCDC144BQ3MJ40 725 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 LACTB2Q53H82 288 aaPredicted RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF805Q5CZA5 627 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 SPINK9Q5DT21 86 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 DNAJC21Q5F1R6 531 aaKnown RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 OR2B11Q5JQS5 317 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 ELFN2Q5R3F8 820 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 THEM4Q5T1C6 240 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 GRTP1Q5TC63 336 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 CCDC181Q5TID7 509 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 RRAGBQ5VZM2 374 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 ZFAND6Q6FIF0 208 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 CCSAPQ6IQ19 270 aaPredicted RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 LCN12Q6JVE5 192 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 LIN54Q6MZP7 749 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 ACSM5Q6NUN0 579 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 RINT1Q6NUQ1 792 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC27A4Q6P1M0 643 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 WDR59Q6PJI9 974 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 CPLX2Q6PUV4 134 aaKnown RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF322Q6U7Q0 402 aaPredicted RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 UNQ6190/PRO20217Q6UXQ8 127 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 ACP7Q6ZNF0 438 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 TPRG1Q6ZUI0 275 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 FAM47EQ6ZV65 393 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 FRA10AC1Q70Z53 315 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 CHST9Q7L1S5 443 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 KRT74Q7RTS7 529 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 CATIPQ7Z7H3 387 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 CAMK2N1Q7Z7J9 78 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 GALNT5Q7Z7M9 940 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 CCDC190Q86UF4 302 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 FAM160B2Q86V87 743 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 NLRP14Q86W24 1093 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 GPBP1Q86WP2 473 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 TDRPQ86YL5 185 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 SUGP1Q8IWZ8 645 aaKnown RBP-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 CDH26Q8IXH8 852 aa-0.48□□□□□ -2.49
TRAJ28-201ENST00000390509 CFAP206Q8IYR0 622 aa-0.48□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms