RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 WWTR1Q9GZV5 400 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 SLC6A15Q9H2J7 730 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 DMRT3Q9NQL9 472 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 CCM2LQ9NUG4 571 aaPredicted RBP16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 LYARQ9NX58 379 aaKnown RBP16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 WHRNQ9P202 907 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 FOXD3Q9UJU5 478 aaPredicted RBP16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 ERVK-19Q9WJR5 959 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 PCDHGA11Q9Y5H2 935 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 IKBKGQ9Y6K9 419 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 NCKAP5O14513 1909 aa16.44■□□□□ 0.22
RPUSD3-201ENST00000383820 CCDC189A1A4V9 331 aa16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 CAPN14A8MX76 684 aa16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 SUPT3HB4E1H0 165 aa16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 DVL2O14641 736 aa16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 PROM1O43490 865 aa16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 SUPT3HO75486 399 aa16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 EPPINO95925 133 aa16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 SLC35E2BP0CK96 405 aa16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 PTX3P26022 381 aaPredicted RBP16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 CRABP2P29373 138 aa16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 CEACAM8P31997 349 aaPredicted RBP16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 ASCL1P50553 236 aa16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 HNRNPH2P55795 449 aaKnown RBP16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 PHEXP78562 749 aa16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 ZNF267Q14586 743 aaPredicted RBP16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 EBPQ15125 230 aaKnown RBP16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 SF3B4Q15427 424 aaKnown RBP eCLIP16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 LIPJQ5W064 366 aa16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 C18orf63Q68DL7 685 aa16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 MRM1Q6IN84 353 aaKnown RBP16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 C3orf62Q6ZUJ4 267 aa16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 SEM1Q6ZVN7 128 aa16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 TBC1D1Q86TI0 1168 aaPredicted RBP16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 TAGAPQ8N103 731 aa16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 FAM222BQ8WU58 562 aa16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 TP53INP1Q96A56 240 aa16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 RMND5BQ96G75 393 aaPredicted RBP16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 ZNF597Q96LX8 424 aa16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 GAL3ST4Q96RP7 486 aa16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 NAPGQ99747 312 aaPredicted RBP16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 GPATCH1Q9BRR8 931 aaKnown RBP16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 DOHHQ9BU89 302 aa16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 CLEC4MQ9H2X3 399 aaPredicted RBP16.43■□□□□ 0.22
RPUSD3-201ENST00000383820 ANKHD1Q8IWZ3 2542 aaKnown RBP16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 FAM187AA6NFU0 413 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 SYCE1LA8MT33 242 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 UBXN8O00124 270 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 TP53I11O14683 189 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 OR10H2O60403 315 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 TRIM3O75382 744 aaPredicted RBP16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 LTA4HP09960 611 aaKnown RBP16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 GDF1P27539 372 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 UQCRC1P31930 480 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 TIMP3P35625 211 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 GNG11P61952 73 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 DLG1Q12959 904 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 DDX39BQ13838 428 aaKnown RBP16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 FLYWCH1Q4VC44 716 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 TMEM198Q66K66 360 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 RAPH1Q70E73 1250 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 MAATS1Q7Z4T9 603 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 CCDC91Q7Z6B0 441 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 LACC1Q8IV20 430 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 CTAGE3PQ8IX95 158 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 RELL2Q8NC24 303 aaPredicted RBP16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 RIT1Q92963 219 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 RNASE6Q93091 150 aaKnown RBP16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 REPS1Q96D71 796 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 SECISBP2Q96T21 854 aaKnown RBP16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 SH3GL2Q99962 352 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 ERP44Q9BS26 406 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 DDX31Q9H8H2 851 aaKnown RBP16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 WDR41Q9HAD4 459 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 GRPEL1Q9HAV7 217 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 SNX15Q9NRS6 342 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 PSD3Q9NYI0 1048 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 CRIM1Q9NZV1 1036 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 ZNF629Q9UEG4 869 aaPredicted RBP16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 MTRF1LQ9UGC7 380 aaKnown RBP16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 ASB4Q9Y574 426 aa16.42■□□□□ 0.22
RPUSD3-201ENST00000383820 NINQ8N4C6 2090 aa16.41■□□□□ 0.22
RPUSD3-201ENST00000383820 A0A0A6YYD5 115 aa16.41■□□□□ 0.22
RPUSD3-201ENST00000383820 A6NNC1 897 aa16.41■□□□□ 0.22
RPUSD3-201ENST00000383820 H0YIV9 168 aa16.41■□□□□ 0.22
RPUSD3-201ENST00000383820 UGDHO60701 494 aa16.41■□□□□ 0.22
RPUSD3-201ENST00000383820 DIAPH2O60879 1101 aa16.41■□□□□ 0.22
RPUSD3-201ENST00000383820 SLC35E2P0CK97 266 aa16.41■□□□□ 0.22
RPUSD3-201ENST00000383820 NR2F6P10588 404 aa16.41■□□□□ 0.22
RPUSD3-201ENST00000383820 MTHFD2P13995 350 aa16.41■□□□□ 0.22
RPUSD3-201ENST00000383820 DNASE1P24855 282 aa16.41■□□□□ 0.22
RPUSD3-201ENST00000383820 TRPC1P48995 793 aa16.41■□□□□ 0.22
RPUSD3-201ENST00000383820 PPP2R2AP63151 447 aa16.41■□□□□ 0.22
RPUSD3-201ENST00000383820 CRYZQ08257 329 aaKnown RBP16.41■□□□□ 0.22
RPUSD3-201ENST00000383820 DUSP8Q13202 625 aa16.41■□□□□ 0.22
RPUSD3-201ENST00000383820 CUL3Q13618 768 aa16.41■□□□□ 0.22
RPUSD3-201ENST00000383820 RPS6KA2Q15349 733 aa16.41■□□□□ 0.22
RPUSD3-201ENST00000383820 ACSF3Q4G176 576 aaPredicted RBP16.41■□□□□ 0.22
RPUSD3-201ENST00000383820 PM20D2Q8IYS1 436 aa16.41■□□□□ 0.22
RPUSD3-201ENST00000383820 RNF175Q8N4F7 328 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms