RNA–Protein interactions for RNA: ENST00000376567.6

DDR1-224, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-224ENST00000376567 SCN2AQ99250 2005 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 CNOT1A5YKK6 2376 aaKnown RBP11.79□□□□□ -0.52
DDR1-224ENST00000376567 TRBV5-4A0A0C4DH59 114 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 TCRBV5S2A0A599 114 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 H0YJX3 145 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 GFYI3L273 518 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 LINC01565O15544 149 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 NTSR1P30989 418 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 CSTF2P33240 577 aaKnown RBP eCLIP11.79□□□□□ -0.52
DDR1-224ENST00000376567 KCNC4Q03721 635 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 DBPQ10586 325 aaPredicted RBP11.79□□□□□ -0.52
DDR1-224ENST00000376567 MYBPC3Q14896 1274 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 LTB4RQ15722 352 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 USP53Q70EK8 1073 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 KRT74Q7RTS7 529 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 SLC9B2Q86UD5 537 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 PDZD3Q86UT5 571 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 LAPTM4BQ86VI4 370 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 SLC22A16Q86VW1 577 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 OR5M3Q8NGP4 307 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 TESCQ96BS2 214 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 MKRN2Q9H000 416 aaKnown RBP11.79□□□□□ -0.52
DDR1-224ENST00000376567 TMEM168Q9H0V1 697 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 LMAN2LQ9H0V9 348 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 NEUROD4Q9HD90 331 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 ZNF624Q9P2J8 865 aaPredicted RBP11.79□□□□□ -0.52
DDR1-224ENST00000376567 SNPHO15079 494 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 CSF2P04141 144 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 GKN3PP0CG01 181 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 SOX3P41225 446 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 NKX3-2P78367 333 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 ERV3-1Q14264 604 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 GNA13Q14344 377 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 ODF4Q2M2E3 257 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 ZNF433Q8N7K0 673 aaPredicted RBP11.79□□□□□ -0.52
DDR1-224ENST00000376567 OR4K5Q8NGD3 323 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 OR6K6Q8NGW6 343 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 PIGXQ8TBF5 258 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 ENKURQ8TC29 256 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 OR5P2Q8WZ92 322 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 NCSTNQ92542 709 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 SH3YL1Q96HL8 342 aaPredicted RBP11.79□□□□□ -0.52
DDR1-224ENST00000376567 BTNL2Q9UIR0 455 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 ACSL5Q9ULC5 683 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 GSTK1Q9Y2Q3 226 aa11.79□□□□□ -0.52
DDR1-224ENST00000376567 EP300Q09472 2414 aaPredicted RBP11.79□□□□□ -0.52
DDR1-224ENST00000376567 PRKNO60260 465 aaPredicted RBP11.78□□□□□ -0.52
DDR1-224ENST00000376567 GPR19Q15760 415 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 C10orf62Q5T681 223 aaPredicted RBP11.78□□□□□ -0.52
DDR1-224ENST00000376567 ZNF655Q8N720 491 aaPredicted RBP11.78□□□□□ -0.52
DDR1-224ENST00000376567 ACOT4Q8N9L9 421 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 ZNF671Q8TAW3 534 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 GAB3Q8WWW8 586 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 LRR1Q96L50 414 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 ASB16Q96NS5 453 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 GFM1Q96RP9 751 aaKnown RBP11.78□□□□□ -0.52
DDR1-224ENST00000376567 MGLLQ99685 303 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 BHLHE41Q9C0J9 482 aaPredicted RBP11.78□□□□□ -0.52
DDR1-224ENST00000376567 NKIRAS2Q9NYR9 191 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 HCN3Q9P1Z3 774 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 UNC13CQ8NB66 2214 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 SLC5A10A0PJK1 596 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 HCN1O60741 890 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 HSD3B1P14060 373 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 HSD3B2P26439 372 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 AKT2P31751 481 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 SLC6A12P48065 614 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 SHC2P98077 582 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 CTBSQ01459 385 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 CBLL1Q75N03 491 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 ZNF554Q86TJ5 538 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 SERPINA11Q86U17 422 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 NRSN1Q8IZ57 195 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 OR51G2Q8NGK0 314 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 RPLP0P6Q8NHW5 317 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 ZFP90Q8TF47 636 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 RSPRY1Q96DX4 576 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 FAM46AQ96IP4 442 aaKnown RBP11.78□□□□□ -0.52
DDR1-224ENST00000376567 KLHL31Q9H511 634 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 RNF167Q9H6Y7 350 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 CARD8Q9Y2G2 431 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 CCDC88CQ9P219 2028 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 TRBV4-1A0A0J9YWV2 114 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 FAM183AA6NL82 134 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 PLPP1O14494 284 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 KHNYNO15037 678 aaKnown RBP11.78□□□□□ -0.52
DDR1-224ENST00000376567 PGRMC2O15173 223 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 ASNA1O43681 348 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 CELP19835 753 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 PTGES3Q15185 160 aaKnown RBP11.78□□□□□ -0.52
DDR1-224ENST00000376567 SLC30A6Q6NXT4 461 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 C1QTNF3Q9BXJ4 246 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 YTHDF1Q9BYJ9 559 aaKnown RBP11.78□□□□□ -0.52
DDR1-224ENST00000376567 KRCC1Q9NPI7 259 aaPredicted RBP11.78□□□□□ -0.52
DDR1-224ENST00000376567 TUBA8Q9NY65 449 aaPredicted RBP11.78□□□□□ -0.52
DDR1-224ENST00000376567 WDR37Q9Y2I8 494 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 ENPP4Q9Y6X5 453 aa11.78□□□□□ -0.52
DDR1-224ENST00000376567 H0YIV9 168 aa11.77□□□□□ -0.52
DDR1-224ENST00000376567 LCMT2O60294 686 aaKnown RBP11.77□□□□□ -0.52
DDR1-224ENST00000376567 PLOD3O60568 738 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms